PROTEIN: HRGMv2_3878_26_27
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Protein File & Metadata
Source:
HRGMv2_3878_26_27.pdb
Genome ID:
Protein ID:
HRGMv2_3878_26_27
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Protein Sequence
MFSGGVYMSA VSEMSGSLSW ITEDIMMAGY ASMTGLTIAF PLLFRILFRF QPRDLLLFSA 60 GVFVVSDYLC MVTDFLPLVV LLSFISGFFK IVGTFVCWSN VQLKITPKRD FAVFFPFLFT 120 FVLGSVQLVN IVTGYSLYAF DWQAMHRITI GTFIVVFALV YFGMRRNYRQ GPYIPFKGID 180 YLGCILWSLW LLCIVFICVY GDYYDWLDGE PIRIAILFAV VLLVMCIQRA ATIRHPYISL 240 GTFSQHNMLF IFILFGCMTL MSATATSTQN IFTSAILGFD ARHNADLNWG VLIGIATGTG 300 IFYLAVNRWK WRVKNIVLTG FFSFLLYQTM LYFLIDTSTE KYMLYLPLVF KGAGVSLVYT 360 SLTYALAGCV TFVYYFEAMC VIGFIRTSFG TPLNSAILSR LFKYVSLENT ASLSGEIDAM 420 HPMAQSFTAL YGEFERQILL VSLKEVYGFV VIAAILILLA ILASDYRWLL KSRPMLRLSQ 480 IWQVVQRQSK QIET 494
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F680-F1-model_v4 | 1 | 479 | 22 | 507 | 0.8203 |
0.8712 |
| AF-G3XD81-F1-model_v4 | 1 | 480 | 24 | 506 | 0.8199 |
0.872 |
| AF-Q9HZ88-F1-model_v4 | 1 | 477 | 9 | 493 | 0.815 |
0.863 |
| AF-Q8ZMK8-F1-model_v4 | 1 | 480 | 24 | 509 | 0.806 |
0.8602 |
| AF-A0A0H3GU91-F1-model_v4 | 1 | 479 | 24 | 509 | 0.8053 |
0.8615 |
| AF-P0AEJ0-F1-model_v4 | 1 | 480 | 24 | 509 | 0.8051 |
0.86 |
| AF-U7PLJ5-F1-model_v4 | 1 | 491 | 1 | 494 | 0.8042 |
0.829 |
| AF-Q2FVL1-F1-model_v4 | 8 | 477 | 1 | 450 | 0.8031 |
0.8602 |
| AF-P52600-F1-model_v4 | 1 | 477 | 28 | 511 | 0.8001 |
0.8605 |
| AF-Q9I008-F1-model_v4 | 1 | 480 | 38 | 529 | 0.7989 |
0.8647 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 1 | 474 | 27 | 535 | 0.7187 |
0.8086 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 1 | 491 | 37 | 480 | 0.651 |
0.7368 |
| ARF89445.1 | GT1 | 1 | 473 | 474 | 953 | 0.6347 |
0.8765 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 1 | 486 | 53 | 679 | 0.6023 |
0.8129 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 477 | 330 | 761 | 0.537 |
0.7498 |
| A0A9Q9RZ67 | GH78 | 1 | 484 | 969 | 1455 | 0.5308 |
0.814 |
| F9G000 | GH3 | 1 | 487 | 74 | 568 | 0.5198 |
0.7886 |
| A0A8S2B775 | GT5 | 1 | 490 | 479 | 924 | 0.5075 |
0.7314 |
| AF-A0A7H8R1M0-F1-model_v4 | GH28 | 1 | 488 | 543 | 1003 | 0.4982 |
0.7137 |
| A0A1S9DVV1 | GH95 | 1 | 475 | 1520 | 2008 | 0.4772 |
0.7975 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 1 | 474 | 27 | 535 | 0.7187 |
0.8086 |
| ARF89445.1 | GT1 | 1 | 473 | 474 | 953 | 0.6347 |
0.8765 |
| A2S189 | GH3 | 1 | 474 | 30 | 413 | 0.6287 |
0.753 |
| A0A387HHJ8 | GT1 | 1 | 486 | 53 | 679 | 0.6023 |
0.8129 |
| A0A7H8RF34 | CBM24 | 1 | 477 | 330 | 761 | 0.537 |
0.7498 |
| S5VEU6 | CE14 | 1 | 494 | 35 | 681 | 0.5313 |
0.6649 |
| A0A9Q9RZ67 | GH78 | 1 | 484 | 969 | 1455 | 0.5308 |
0.814 |
| F9G000 | GH3 | 1 | 487 | 74 | 568 | 0.5198 |
0.7886 |
| A0A8S2B775 | GT5 | 1 | 490 | 479 | 924 | 0.5075 |
0.7314 |
| A0A7H8R1M0 | GH28 | 1 | 488 | 543 | 1003 | 0.4982 |
0.7137 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 1 | 471 | 17 | 483 | 0.7726 |
0.8261 |
| 7y58-assembly1.cif.gz_A | 1 | 476 | 24 | 510 | 0.7639 |
0.8223 |
| 8pnl-assembly2.cif.gz_C | 1 | 471 | 18 | 486 | 0.7635 |
0.8161 |
| 7d5p-assembly2.cif.gz_B | 1 | 471 | 11 | 413 | 0.7274 |
0.8273 |
| 7d5p-assembly1.cif.gz_A | 1 | 470 | 12 | 408 | 0.7232 |
0.8288 |
| 7d5q-assembly2.cif.gz_B | 1 | 471 | 10 | 411 | 0.7203 |
0.8198 |
| 7d5q-assembly1.cif.gz_A | 1 | 471 | 11 | 403 | 0.7179 |
0.8255 |
| 8g92-assembly1.cif.gz_A | 1 | 480 | 17 | 415 | 0.6747 |
0.7775 |
| 7zc2-assembly1.cif.gz_A | 1 | 468 | 21 | 469 | 0.6553 |
0.7208 |
| 7dla-assembly1.cif.gz_A | 1 | 466 | 14 | 402 | 0.6515 |
0.7575 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 1 | 479 | 22 | 507 | 0.8243 |
0.8759 |
| AF-P0DPR7-F1-model_v4 | 1 | 474 | 28 | 512 | 0.8124 |
0.8748 |
| AF-P0AEJ1-F1-model_v4 | 1 | 479 | 24 | 509 | 0.8064 |
0.8621 |
| AF-P0AEJ0-F1-model_v4 | 1 | 480 | 24 | 509 | 0.8051 |
0.86 |
| AF-P52600-F1-model_v4 | 1 | 477 | 28 | 511 | 0.8001 |
0.8605 |
| AF-P44927-F1-model_v4 | 1 | 477 | 28 | 510 | 0.7975 |
0.856 |
| AF-P32369-F1-model_v4 | 1 | 474 | 23 | 473 | 0.796 |
0.8722 |
| AF-O35018-F1-model_v4 | 1 | 480 | 26 | 479 | 0.786 |
0.8574 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 473 | 24 | 471 | 0.7842 |
0.8592 |
| AF-P94422-F1-model_v4 | 1 | 480 | 24 | 471 | 0.784 |
0.8601 |