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PROTEIN: HRGMv2_3878_21_42

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3878_21_42.pdb
Genome ID:
HRGMv2_3878
Protein ID:
HRGMv2_3878_21_42

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Detailed structural information will appear here after analysis...

Protein Sequence 
MPQQESRVKK   SLLNARVNLI   FYFLTLVLSF   FSRKIFLDTL   GADFVGLTVT   LQNLLGFLNL 60
AELGIGSAIG   YVLYKPLFDH   DEGKINEIIS   VFGYLYRWIG   FIILGAGLVL   ACFLPLIFPN 120
TQFEIGIIFF   AYFAFLASSL   IGYFANYKQT   LLGADQKNYV   VTAYFQTANI   VKVLIQIASA 180
YYTGSYYLWA   SIELIFGIIF   SIILNWKIKQ   VYPWLRSEVR   LGKQLFKKYP   EVMKYTKQLF 240
VHKMGGFIQW   QTTPFLIYAF   VSLQTVAYYG   NYTIIVDKIN   SFISNFLDST   GAGVGSLIAE 300
GNRDKEYRVF   WELLAIRFFV   SGAVMFSIFM   LIEPFISLWL   GFEYVLPRMV   LIIILINFFL 360
NITRGATDQF   IYGHGLFYDT   WSPIVESSIY   IIVAIIGGHF   LGLKGVLLGA   TVSLTLVIGC 420
WKPYFLFTKG   FKMPVVKYWI   GWSKYILLIS   LSGVLTYYLV   SLIPLTLPYK   SWLSWIVYAV 480
VTTFSIIIVE   LTFLLLFTQG   MRDFARRIIK 510
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q58467-F1-model_v4 4 510 1 503 0.8477 0.8749
AF-Q2G262-F1-model_v4 4 510 1 473 0.8449 0.8951
AF-Q8DPI1-F1-model_v4 4 510 1 487 0.8327 0.8747
AF-A0A0H3GSJ3-F1-model_v4 5 510 1 476 0.8314 0.8791
AF-H9L497-F1-model_v4 5 510 1 492 0.8229 0.8562
AF-P77377-F1-model_v4 5 510 1 492 0.8215 0.8549
AF-Q32ET1-F1-model_v4 6 510 1 511 0.8133 0.8423
AF-P0AF16-F1-model_v4 5 510 1 511 0.8132 0.8411
AF-Q9HVM2-F1-model_v4 5 510 1 512 0.8126 0.8415
AF-A0A0H3GRG5-F1-model_v4 5 510 1 511 0.8095 0.8378
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 4 510 1 506 0.8342 0.8631
AF-A0A160T2N7-F1-model_v4 GT28 3 510 35 544 0.7924 0.8397
QNU38870.1 GT4 6 510 1 471 0.7305 0.8663
QJC17489.1 GT2 1 510 128 838 0.6854 0.8621
AF-A0A3T0RPT8-F1-model_v4 GT4 4 510 2 594 0.6751 0.8543
AF-A0A3Q9G719-F1-model_v4 GT4 4 510 1 596 0.6668 0.8625
AF-D1BIF1-F1-model_v4 GT4 3 510 7 536 0.6619 0.8732
AF-F9ZKY1-F1-model_v4 GT2 1 510 14 517 0.6491 0.827
AF-A1R6N5-F1-model_v4 GT2 1 510 2 477 0.647 0.8677
A0A0C5BEZ8 GT4 9 510 1 894 0.6438 0.8379
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 4 510 1 506 0.8342 0.8631
A0A160T2N7 GT28 3 510 35 544 0.7924 0.8397
QNU38870.1 GT4 6 510 1 471 0.7305 0.8663
QJC17489.1 GT2 1 510 128 838 0.6854 0.8621
A0A3T0RPT8 GT4 4 510 2 594 0.6751 0.8543
A0A3Q9G719 GT4 4 510 1 596 0.6668 0.8625
D1BIF1 GT4 3 510 7 536 0.6619 0.8732
F9ZKY1 GT2 1 510 14 517 0.6491 0.827
A0A0C5BEZ8 GT4 9 510 1 894 0.6438 0.8379
A0A2U8PPB3 GT4 7 510 1 562 0.6402 0.8105
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7waw-assembly1.cif.gz_A 12 508 1 496 0.7981 0.8299
6nc6-assembly2.cif.gz_B 12 509 1 461 0.7914 0.849
7wag-assembly1.cif.gz_A 8 510 2 513 0.7645 0.8054
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P71060-F1-model_v4 8 510 1 494 0.8571 0.8967
AF-Q58467-F1-model_v4 4 510 1 503 0.8477 0.8749
AF-Q48457-F1-model_v4 5 510 1 480 0.8336 0.8814
AF-O34238-F1-model_v4 3 510 2 525 0.8243 0.8576
AF-D4GU68-F1-model_v4 5 510 1 468 0.8231 0.8795
AF-P77377-F1-model_v4 5 510 1 492 0.8215 0.8549
AF-D4GYG8-F1-model_v4 7 510 1 473 0.8208 0.8725
AF-O83529-F1-model_v4 2 510 2 524 0.8188 0.8529
AF-O32273-F1-model_v4 4 510 1 478 0.8149 0.8644
AF-P0AF17-F1-model_v4 5 510 1 511 0.8141 0.842
Download Full SwissProt Results