PROTEIN: HRGMv2_3878_17_31
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Protein File & Metadata
Source:
HRGMv2_3878_17_31.pdb
Genome ID:
Protein ID:
HRGMv2_3878_17_31
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Protein Sequence
MRVALILATS IEKSPYVQYY IDIYERMGAD IEIILLNRDK KVIKRETLHR IYSCDIVARE 60 TAPGYRKVYD YIRYSRFVQE VLGKSSYDQV VVFTIANALF LSPYLLKYYR GRYIFDIRDY 120 SPLVGYSGPV LRRLLKNSSL NVLSSPGFRA WLPKCESVIC HNVRPSFLAD SVGQARDIDC 180 RNIVVLTIGQ LRDYETNRWV MESLGDKPAV RLQFSGKGIA CESLEQYKVE QGYNNVSFTG 240 YYHKSDELSI VDGCDFMNII LPDDKLSRHL ISNRFYLALL RRKPMLVSEG SIQAEYVKKF 300 GLGIVISAED NIFDKIIAYA RLFDPHAFEQ NCNRLLQQVK FDTEDFSKRI LDSSIV 356
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 1 | 353 | 1 | 369 | 0.8269 |
0.8687 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 356 | 6 | 381 | 0.8001 |
0.8464 |
| AF-Q7CQX6-F1-model_v4 | 1 | 356 | 2 | 377 | 0.7962 |
0.8392 |
| AF-Q58577-F1-model_v4 | 1 | 356 | 4 | 351 | 0.7951 |
0.8299 |
| AF-Q5FAD9-F1-model_v4 | 1 | 356 | 1 | 354 | 0.7914 |
0.8183 |
| AF-Q5F602-F1-model_v4 | 1 | 355 | 1 | 376 | 0.7897 |
0.835 |
| AF-O05083-F1-model_v4 | 1 | 354 | 1 | 353 | 0.783 |
0.81 |
| AF-Q9I3V9-F1-model_v4 | 1 | 353 | 4 | 374 | 0.7771 |
0.8246 |
| AF-Q0P9C7-F1-model_v4 | 1 | 355 | 2 | 365 | 0.776 |
0.8103 |
| AF-K0ETY5-F1-model_v4 | 1 | 356 | 2 | 382 | 0.7738 |
0.8248 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A679HC30-F1-model_v4 | GT0 | 1 | 356 | 1 | 363 | 0.9267 |
0.9479 |
| A0A9E8VVQ4 | GT4 | 1 | 356 | 2 | 361 | 0.9169 |
0.9366 |
| AF-A0A2S0M927-F1-model_v4 | GT4 | 1 | 356 | 1 | 362 | 0.9138 |
0.9334 |
| A0A642KMN4 | GT4 | 1 | 356 | 2 | 361 | 0.8655 |
0.8932 |
| A0A979G0J6 | GT4 | 1 | 355 | 2 | 359 | 0.8508 |
0.8753 |
| AF-W0I568-F1-model_v4 | GT4 | 1 | 355 | 1 | 362 | 0.8453 |
0.8727 |
| AF-A0A0X8FM80-F1-model_v4 | GT4 | 1 | 353 | 1 | 369 | 0.8372 |
0.8785 |
| QYE97353.1 | GT4 | 1 | 355 | 1 | 372 | 0.8354 |
0.8741 |
| AF-A0A0E0VKF9-F1-model_v4 | GT4 | 1 | 356 | 1 | 369 | 0.8284 |
0.8638 |
| AF-T1Y6I5-F1-model_v4 | GT4 | 1 | 353 | 1 | 369 | 0.8284 |
0.8702 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQK46245.1 | GT4 | 1 | 355 | 2 | 363 | 0.9213 |
0.9464 |
| AYE52411.1 | GT4 | 1 | 355 | 1 | 357 | 0.9191 |
0.9363 |
| A0A9E8VVQ4 | GT4 | 1 | 356 | 2 | 361 | 0.9169 |
0.9366 |
| A0A2S0M927 | GT4 | 1 | 356 | 1 | 362 | 0.9138 |
0.9334 |
| A0A088T3C5 | GT4 | 33 | 356 | 1 | 320 | 0.8766 |
0.9371 |
| A0A0D8IDG1 | GT4 | 1 | 356 | 2 | 358 | 0.8674 |
0.8889 |
| A0A5M6AI14 | GT4 | 1 | 356 | 5 | 369 | 0.8562 |
0.8891 |
| A0A654RU67 | GT4 | 1 | 356 | 2 | 361 | 0.8508 |
0.8758 |
| A0A3A9VVF1 | GT4 | 1 | 356 | 5 | 361 | 0.8507 |
0.876 |
| A0A0B5APU6 | GT4 | 1 | 356 | 2 | 359 | 0.8471 |
0.8697 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6kih-assembly2.cif.gz_B | 1 | 356 | 2 | 398 | 0.7688 |
0.8319 |
| 4xyw-assembly1.cif.gz_A | 1 | 352 | 2 | 324 | 0.7666 |
0.8279 |
| 5ze7-assembly1.cif.gz_B | 1 | 356 | 3 | 353 | 0.7639 |
0.7974 |
| 5zes-assembly1.cif.gz_A | 1 | 356 | 3 | 352 | 0.7634 |
0.7989 |
| 8b5s-assembly1.cif.gz_A | 1 | 355 | 1 | 363 | 0.7588 |
0.7886 |
| 7mi0-assembly1.cif.gz_A | 1 | 356 | 4 | 379 | 0.7542 |
0.7984 |
| 8b62-assembly2.cif.gz_B | 1 | 352 | 1 | 362 | 0.7525 |
0.7877 |
| 4xsp-assembly1.cif.gz_A | 1 | 356 | 1 | 365 | 0.7515 |
0.783 |
| 5ze7-assembly1.cif.gz_A | 1 | 356 | 3 | 349 | 0.7511 |
0.79 |
| 8b63-assembly1.cif.gz_A | 1 | 353 | 2 | 365 | 0.7491 |
0.7851 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58577-F1-model_v4 | 1 | 356 | 4 | 351 | 0.7951 |
0.8299 |
| AF-Q8KIU8-F1-model_v4 | 1 | 356 | 2 | 398 | 0.7943 |
0.8598 |
| AF-P71053-F1-model_v4 | 1 | 356 | 3 | 374 | 0.786 |
0.8319 |
| AF-O05083-F1-model_v4 | 1 | 354 | 1 | 353 | 0.783 |
0.81 |
| AF-P33694-F1-model_v4 | 1 | 356 | 2 | 382 | 0.7801 |
0.8481 |
| AF-Q0P9C7-F1-model_v4 | 1 | 355 | 2 | 365 | 0.776 |
0.8103 |
| AF-P0DMP7-F1-model_v4 | 1 | 353 | 2 | 338 | 0.7732 |
0.819 |
| AF-P0DMP6-F1-model_v4 | 1 | 353 | 2 | 338 | 0.7724 |
0.818 |
| AF-Q06994-F1-model_v4 | 1 | 356 | 1 | 359 | 0.7689 |
0.7977 |
| AF-Q0P9C9-F1-model_v4 | 1 | 356 | 1 | 376 | 0.768 |
0.811 |