PROTEIN: HRGMv2_3867_11_41
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Protein File & Metadata
Source:
HRGMv2_3867_11_41.pdb
Genome ID:
Protein ID:
HRGMv2_3867_11_41
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Protein Sequence
MAHHMPPVRM FTQLLMFKAS VPHSVRFWTL MVFILFYQFT GGIYLSSISQ IEGDLAFWSE 60 DVTMASYCSL IGLNLIFPVL FRWKFFFYTR QMWFVSSIGS LVCAVGAFYT SVPWLFCGIC 120 LFAGYFKMMG MFACVSNVQL NWTPTRSFGV FLPIIYLFVL GTLRLSDITS TLVAYHTNWK 180 LMYCVIVAMM LAIDAAAYFM MKPDHRCGPF VPLKGVDWTG QLLWGAVCVC GAYIFNYGEH 240 YEWWESERIW TATWLFIALL AICLLRMKRK GDSAFISPKA FSYPITYFLM ALLLGETVIS 300 GIAHYVQPIY VNAVLGYDSM NALDLNYPQL AGIVMGAILA FYGIIKLRWS LRTYFIACMI 360 FFFIYAATMY FIAVPSTPKE YLCVPLFFLA IGEVMMETGA TYALSQHVPF PVFFMNITII 420 GFVRCGVGSS AGAAFVEHTF AKFSIDYGPL AAIREIYGLG TIMIIFMAVM ILLSNYRSIP 480 GKLIPKWSTI VRHLRK 496
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GPJ5-F1-model_v4 | 5 | 481 | 1 | 470 | 0.8193 |
0.8627 |
| AF-Q9I482-F1-model_v4 | 6 | 480 | 4 | 470 | 0.8125 |
0.8646 |
| AF-G3XD81-F1-model_v4 | 3 | 484 | 1 | 503 | 0.8103 |
0.8597 |
| AF-Q32DH7-F1-model_v4 | 8 | 485 | 7 | 512 | 0.8029 |
0.8606 |
| AF-Q2G199-F1-model_v4 | 7 | 481 | 1 | 458 | 0.7992 |
0.8502 |
| AF-Q9I260-F1-model_v4 | 3 | 483 | 1 | 465 | 0.7987 |
0.8472 |
| AF-Q5F680-F1-model_v4 | 8 | 486 | 2 | 507 | 0.7969 |
0.8478 |
| AF-A0A0H3GUZ8-F1-model_v4 | 1 | 486 | 1 | 497 | 0.796 |
0.8316 |
| AF-P52600-F1-model_v4 | 10 | 484 | 6 | 511 | 0.7956 |
0.8595 |
| AF-A0A0H3GM25-F1-model_v4 | 13 | 479 | 9 | 461 | 0.793 |
0.8563 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 4 | 481 | 7 | 533 | 0.732 |
0.818 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 496 | 16 | 479 | 0.6855 |
0.7472 |
| AF-A2S189-F1-model_v4 | GH3 | 2 | 481 | 1 | 413 | 0.6699 |
0.7551 |
| WBC00074.1 | CBM42 , GH2 | 1 | 485 | 2 | 493 | 0.6382 |
0.6849 |
| A0A9W8R2E6 | GH88 | 3 | 493 | 38 | 505 | 0.6374 |
0.7036 |
| ARF89445.1 | GT1 | 1 | 481 | 11 | 953 | 0.6351 |
0.8654 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 9 | 489 | 29 | 675 | 0.6169 |
0.8426 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 2 | 496 | 1 | 762 | 0.5745 |
0.7108 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 4 | 490 | 6 | 474 | 0.5719 |
0.7426 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 484 | 290 | 760 | 0.5695 |
0.7374 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 4 | 481 | 7 | 533 | 0.732 |
0.818 |
| A2S189 | GH3 | 2 | 481 | 1 | 413 | 0.6699 |
0.7551 |
| WBC00074.1 | CBM42 , GH2 | 1 | 485 | 2 | 493 | 0.6382 |
0.6849 |
| A0A9W8R2E6 | GH88 | 3 | 493 | 38 | 505 | 0.6374 |
0.7036 |
| ARF89445.1 | GT1 | 1 | 481 | 11 | 953 | 0.6351 |
0.8654 |
| A0A387HHJ8 | GT1 | 9 | 489 | 29 | 675 | 0.6169 |
0.8426 |
| A0A3C1RID2 | GH17 | 1 | 496 | 1 | 730 | 0.5729 |
0.7094 |
| A0A7H8RF34 | CBM24 | 1 | 484 | 290 | 760 | 0.5695 |
0.7374 |
| A0A918L8E6 | GT2 | 12 | 485 | 1 | 440 | 0.5624 |
0.7328 |
| A0A3S4KEY5 | GH36 | 1 | 480 | 193 | 707 | 0.5505 |
0.6786 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7y58-assembly1.cif.gz_A | 8 | 485 | 7 | 510 | 0.7555 |
0.8117 |
| 8pnl-assembly1.cif.gz_A | 9 | 479 | 1 | 483 | 0.7454 |
0.7935 |
| 7d5p-assembly2.cif.gz_B | 26 | 478 | 1 | 413 | 0.7449 |
0.8303 |
| 7d5p-assembly1.cif.gz_A | 12 | 478 | 1 | 408 | 0.7427 |
0.8321 |
| 7d5q-assembly2.cif.gz_B | 26 | 478 | 1 | 411 | 0.7409 |
0.8281 |
| 8pnl-assembly2.cif.gz_C | 8 | 479 | 1 | 486 | 0.7392 |
0.7877 |
| 6kkl-assembly1.cif.gz_A | 21 | 479 | 1 | 372 | 0.7349 |
0.8541 |
| 7d5q-assembly1.cif.gz_A | 26 | 478 | 1 | 403 | 0.7332 |
0.8264 |
| 6oom-assembly2.cif.gz_A-2 | 17 | 477 | 1 | 392 | 0.7243 |
0.8268 |
| 6kkj-assembly1.cif.gz_B | 23 | 478 | 1 | 357 | 0.7211 |
0.8527 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DPR7-F1-model_v4 | 2 | 481 | 1 | 512 | 0.8039 |
0.8569 |
| AF-Q9RQ29-F1-model_v4 | 8 | 485 | 2 | 506 | 0.8025 |
0.8556 |
| AF-P32369-F1-model_v4 | 3 | 482 | 1 | 474 | 0.8024 |
0.8421 |
| AF-P94422-F1-model_v4 | 3 | 486 | 3 | 469 | 0.802 |
0.8489 |
| AF-P0AEJ1-F1-model_v4 | 6 | 484 | 2 | 507 | 0.8001 |
0.8572 |
| AF-P44903-F1-model_v4 | 9 | 483 | 1 | 460 | 0.8001 |
0.8524 |
| AF-P0AEJ0-F1-model_v4 | 6 | 484 | 2 | 507 | 0.7983 |
0.8555 |
| AF-P52600-F1-model_v4 | 10 | 484 | 6 | 511 | 0.7956 |
0.8595 |
| AF-P94574-F1-model_v4 | 10 | 480 | 1 | 451 | 0.7949 |
0.8524 |
| AF-P44927-F1-model_v4 | 10 | 483 | 7 | 510 | 0.7945 |
0.8585 |