PROTEIN: HRGMv2_3866_9_76
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3866_9_76.pdb
Genome ID:
Protein ID:
HRGMv2_3866_9_76
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKSTLLMFA LFLSVLGGYA QQNRWKITDT GAIEWNIDKR LPHNDHVELS GQQLSVVLRY 60 SVNADGAFHI NRSLVFPMLR MQPVTRTQAN LMQRIELDIP QLVTVMNMNP QNEKVSKITF 120 DGLLTVESSF DYMAGRKKVE KGLELTRIHY PSTESSYYLE EYTYRNSGSV NAVLRLPNLK 180 LEYAIPADQT LYGNYLIDVN ISKSGWFELK PGETLSFHVV FSARKADQPS FANINVDAER 240 RARQTLVKEW WSNLVLDTPD TVLNRMFAFA KLRGSESIYK TKGGFMHGPG GEAYYAAIWA 300 NDQAEYINPF FPFLGYSVGN ESAINSYRHF ARFMNPEYKP IPSSIISEGA SIWHGAKDRG 360 DGAMIAYGAA RYALARGSKA EAEELWPLIE WTLEYCRRKL TGKGVVASDS DELENRFPAG 420 DTNITTSSLY YDALISAVYL GKELGKPARQ LAEYKKEAEA LRKAIESHFG YTVEGFDTYR 480 YYEGNDVLRS WICIPLTMGI YDRAEGTIKA LFSPHMWTDD GLLTQAGTET FWDRSTLYAL 540 RGVFAAGATE KGLEYLKKYS NRRLLGEHVP YAVEAWPEGS QRHLSAESGL YCRIYTEGLF 600 GIRPTGLRSF EMTPHLPAEW NYMNLKAVRA FDQNFDIDIT RKGKSLDVIV KNQSGIITQK 660 QIKPGETIQV KFK 673
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W6Z5-F1-model_v4 | 22 | 665 | 5 | 792 | 0.7241 |
0.8257 |
| AF-U7PID1-F1-model_v4 | 22 | 673 | 6 | 804 | 0.7176 |
0.8201 |
| AF-Q8BP56-F1-model_v4 | 26 | 673 | 3 | 688 | 0.7175 |
0.7703 |
| AF-D3ZY02-F1-model_v4 | 26 | 673 | 3 | 688 | 0.7163 |
0.7722 |
| AF-Q9VKD9-F1-model_v4 | 27 | 673 | 20 | 738 | 0.7157 |
0.7918 |
| AF-Q54KX5-F1-model_v4 | 25 | 673 | 16 | 710 | 0.7102 |
0.7722 |
| AF-Q59005-F1-model_v4 | 41 | 611 | 1 | 615 | 0.6999 |
0.7961 |
| AF-Q32M88-F1-model_v4 | 26 | 673 | 3 | 689 | 0.6995 |
0.7726 |
| AF-A0A133CSL2-F1-model_v4 | 28 | 673 | 9 | 687 | 0.697 |
0.7548 |
| AF-Q49736-F1-model_v4 | 19 | 673 | 1 | 751 | 0.6852 |
0.7724 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2Z0H3-F1-model_v4 | CBM0 | 3 | 673 | 10 | 876 | 0.838 |
0.9538 |
| AF-D1CGZ9-F1-model_v4 | GH0 | 22 | 663 | 1 | 710 | 0.7543 |
0.8686 |
| AF-A0A7T5JTW5-F1-model_v4 | GH0 | 44 | 667 | 1 | 694 | 0.7493 |
0.8326 |
| AF-Q0W318-F1-model_v4 | GH0 | 43 | 667 | 1 | 692 | 0.7445 |
0.8231 |
| A3Z095 | GH176 | 39 | 663 | 1 | 706 | 0.7444 |
0.8309 |
| AF-A0A1B1Z3C9-F1-model_v4 | GH0 | 44 | 666 | 1 | 701 | 0.7436 |
0.8298 |
| AF-A0A1W5ZSM0-F1-model_v4 | GH0 | 44 | 669 | 1 | 704 | 0.7432 |
0.8274 |
| AF-A0A075WTA1-F1-model_v4 | GH0 | 41 | 663 | 4 | 703 | 0.7422 |
0.8293 |
| WFB34355.1 | GH94 | 24 | 673 | 6 | 760 | 0.7421 |
0.8299 |
| AF-F5L3Y8-F1-model_v4 | GH0 | 44 | 667 | 1 | 699 | 0.742 |
0.8255 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WFB35204.1 | GH94 | 19 | 673 | 1 | 753 | 0.7583 |
0.8315 |
| A0A1Q2MCY1 | GH94 | 20 | 673 | 2 | 749 | 0.7488 |
0.8268 |
| A0A089LI24 | GH94 | 21 | 673 | 1 | 757 | 0.7451 |
0.8268 |
| A3Z095 | GH176 | 39 | 663 | 1 | 706 | 0.7444 |
0.8309 |
| A0A089KG41 | GH94 | 20 | 666 | 3 | 771 | 0.7443 |
0.8345 |
| QYY36758.1 | GH94 | 19 | 665 | 1 | 757 | 0.7439 |
0.8276 |
| WFB34355.1 | GH94 | 24 | 673 | 6 | 760 | 0.7421 |
0.8299 |
| A0A482D4L9 | GH94 | 21 | 673 | 4 | 775 | 0.7411 |
0.8315 |
| F9VLH0 | GH94 | 20 | 673 | 2 | 768 | 0.7391 |
0.8259 |
| C9RC19 | GH15 | 22 | 669 | 1 | 608 | 0.7391 |
0.788 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1v7v-assembly1.cif.gz_A | 21 | 673 | 1 | 766 | 0.7348 |
0.8211 |
| 8bou-assembly1.cif.gz_A | 19 | 673 | 1 | 794 | 0.7272 |
0.8226 |
| 8ho8-assembly1.cif.gz_B | 23 | 673 | 1 | 797 | 0.7236 |
0.824 |
| 8ho9-assembly1.cif.gz_A | 22 | 673 | 1 | 798 | 0.7226 |
0.8227 |
| 4zlf-assembly1.cif.gz_A | 24 | 673 | 1 | 772 | 0.7225 |
0.8138 |
| 3s4b-assembly1.cif.gz_A | 22 | 673 | 1 | 810 | 0.7223 |
0.8266 |
| 3qde-assembly1.cif.gz_B | 21 | 673 | 1 | 798 | 0.7218 |
0.8206 |
| 7fe3-assembly1.cif.gz_A | 25 | 641 | 1 | 659 | 0.7208 |
0.7908 |
| 3afj-assembly1.cif.gz_B | 22 | 673 | 1 | 810 | 0.7205 |
0.8245 |
| 3acs-assembly1.cif.gz_B | 22 | 673 | 1 | 810 | 0.7201 |
0.8242 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9F8X1-F1-model_v4 | 21 | 663 | 1 | 800 | 0.7297 |
0.8366 |
| AF-Q76IQ9-F1-model_v4 | 22 | 673 | 1 | 788 | 0.7294 |
0.8258 |
| AF-B9K7M6-F1-model_v4 | 22 | 673 | 1 | 800 | 0.7247 |
0.8255 |
| AF-Q7S0S2-F1-model_v4 | 22 | 673 | 6 | 779 | 0.7244 |
0.8161 |
| AF-Q8P3J4-F1-model_v4 | 19 | 664 | 9 | 798 | 0.7238 |
0.8254 |
| AF-Q8BP56-F1-model_v4 | 26 | 673 | 3 | 688 | 0.7175 |
0.7703 |
| AF-F1NZI4-F1-model_v4 | 26 | 673 | 15 | 697 | 0.712 |
0.7699 |
| AF-Q54KX5-F1-model_v4 | 25 | 673 | 16 | 710 | 0.7102 |
0.7722 |
| AF-Q4J9D4-F1-model_v4 | 44 | 616 | 1 | 576 | 0.7007 |
0.768 |
| AF-Q59005-F1-model_v4 | 41 | 611 | 1 | 615 | 0.6999 |
0.7961 |