PROTEIN: HRGMv2_3866_3_190
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Protein File & Metadata
Source:
HRGMv2_3866_3_190.pdb
Genome ID:
Protein ID:
HRGMv2_3866_3_190
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Protein Sequence
MTNSEIKVGY LISYDYEYIK NSLPLIYNEV EYIAIAVDIN RRTWVGKEFE IPDTFFRWLQ 60 DFDTENKIHL YEDDFCVPDL TPMQCETRER NMLSRFMGKG GWHVQIDTDE YFIDFKGFKE 120 YVSRYMDYDT EQVLLVPFYT IFKEDSSGFF VVKDADEYVP VAFNNPEFIR ARYADCKKTH 180 VVPTPILHQS WAKDEDQIRK KIDNWGHKND FDTEKYFQLW KFVDSYTYKK LKNLHPLAEN 240 SWKTLEYIPT TDISELIEVL KKQDSEKRAE LMVQQKIKGS DFLPPIYYRI KRVVKRKLKL 300 K 301
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44029-F1-model_v4 | 2 | 248 | 1 | 227 | 0.6164 |
0.7582 |
| AF-C0NYK4-F1-model_v4 | 1 | 258 | 68 | 358 | 0.5698 |
0.7516 |
| AF-U7PQX4-F1-model_v4 | 1 | 259 | 72 | 388 | 0.5619 |
0.7552 |
| AF-C4J217-F1-model_v4 | 1 | 258 | 82 | 349 | 0.5579 |
0.7198 |
| AF-Q9SKF0-F1-model_v4 | 1 | 259 | 77 | 346 | 0.5559 |
0.7121 |
| AF-A0A0P0VL50-F1-model_v4 | 1 | 258 | 89 | 354 | 0.5532 |
0.7164 |
| AF-I1LZQ1-F1-model_v4 | 1 | 258 | 87 | 354 | 0.5524 |
0.7157 |
| AF-K7ML44-F1-model_v4 | 1 | 258 | 87 | 354 | 0.5511 |
0.7136 |
| AF-Q2QMA5-F1-model_v4 | 1 | 258 | 82 | 349 | 0.5497 |
0.7092 |
| AF-Q9SS93-F1-model_v4 | 1 | 258 | 106 | 372 | 0.549 |
0.7242 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6M3IPV2-F1-model_v4 | GT2 | 5 | 257 | 1 | 230 | 0.7012 |
0.8215 |
| AF-A0A6H1Q3L3-F1-model_v4 | GT17 | 2 | 261 | 1 | 262 | 0.6606 |
0.7499 |
| A0A6J5LN72 | GT17 | 2 | 271 | 1 | 284 | 0.653 |
0.7295 |
| AF-A0A1X7H6X4-F1-model_v4 | GT17 | 2 | 262 | 1 | 253 | 0.6488 |
0.7465 |
| AF-A0A1Z3N959-F1-model_v4 | GT17 | 5 | 259 | 1 | 266 | 0.647 |
0.7487 |
| WCT73004.1 | GT17 | 4 | 258 | 1 | 254 | 0.6469 |
0.7462 |
| AF-A0A2Z4JQI7-F1-model_v4 | GT17 | 1 | 259 | 1 | 274 | 0.6468 |
0.7466 |
| AMJ95888.1 | GT17 | 5 | 259 | 1 | 241 | 0.6449 |
0.7526 |
| A0A2K9R7I7 | GT17 | 4 | 259 | 1 | 252 | 0.6448 |
0.7323 |
| A0A6J5NJ84 | GT17 | 5 | 259 | 1 | 235 | 0.6445 |
0.7634 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6M3IPV2 | GT2 | 5 | 257 | 1 | 230 | 0.7012 |
0.8215 |
| A0A6H1Q3L3 | GT17 | 2 | 261 | 1 | 262 | 0.6606 |
0.7499 |
| A0A6J7WPK1 | GT2 | 4 | 261 | 1 | 255 | 0.6601 |
0.7368 |
| A0A6J5LN72 | GT17 | 2 | 271 | 1 | 284 | 0.653 |
0.7295 |
| A0A1X7H6X4 | GT17 | 2 | 262 | 1 | 253 | 0.6488 |
0.7465 |
| A0A075HQW1 | GT2 | 2 | 256 | 1 | 246 | 0.6487 |
0.7346 |
| WCT73004.1 | GT17 | 4 | 258 | 1 | 254 | 0.6469 |
0.7462 |
| AMJ95888.1 | GT17 | 5 | 259 | 1 | 241 | 0.6449 |
0.7526 |
| A0A2K9R7I7 | GT17 | 4 | 259 | 1 | 252 | 0.6448 |
0.7323 |
| A0A6J5NJ84 | GT17 | 5 | 259 | 1 | 235 | 0.6445 |
0.7634 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44029-F1-model_v4 | 2 | 248 | 1 | 227 | 0.6164 |
0.7582 |
| AF-Q92IX8-F1-model_v4 | 1 | 247 | 4 | 238 | 0.5777 |
0.7244 |
| AF-Q4UMM0-F1-model_v4 | 2 | 247 | 1 | 233 | 0.5728 |
0.7251 |
| AF-Q1RJ60-F1-model_v4 | 2 | 247 | 5 | 238 | 0.5629 |
0.7222 |
| AF-O05944-F1-model_v4 | 2 | 247 | 1 | 233 | 0.5609 |
0.7193 |
| AF-Q68XF1-F1-model_v4 | 2 | 247 | 1 | 233 | 0.5609 |
0.7194 |
| AF-P9WKW8-F1-model_v4 | 4 | 267 | 1 | 386 | 0.5219 |
0.6879 |
| AF-P0A5H2-F1-model_v4 | 2 | 267 | 1 | 386 | 0.5202 |
0.6813 |
| AF-P9WKW9-F1-model_v4 | 4 | 267 | 1 | 386 | 0.5162 |
0.6784 |
| AF-Q6GDN6-F1-model_v4 | 2 | 238 | 34 | 350 | 0.4905 |
0.6879 |