PROTEIN: HRGMv2_3866_2_138
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Protein File & Metadata
Source:
HRGMv2_3866_2_138.pdb
Genome ID:
Protein ID:
HRGMv2_3866_2_138
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Protein Sequence
MKTGIGLFII WCISIGSVLG QTDTSFFKIY CFPSDRIPKI DGDTHDWDMV PQSYALGMDQ 60 MTEDEGKHVK PDKNNLDISV KVGWVEGQNR LYFLYEAYDN YWSFSRNDLM VDIFEVVVDG 120 DRSGGMFIDK FYPFKDVSKE EAWNLFHGRQ AQNYHIYTPP KNGDWCMYWG PQQWLKEKPY 180 SDYCYRYDFK EGDSGKLTLE FYITPFDYAS PDGAEFSVES RLTVNKLIGL CWAVIDYDNN 240 EGKPKDGFWN LSRHHTMYGN ASQLRTFRLM PLE 273
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C0NE40-F1-model_v4 | 19 | 270 | 24 | 238 | 0.6044 |
0.7291 |
| AF-Q9LZQ3-F1-model_v4 | 21 | 273 | 30 | 310 | 0.552 |
0.6906 |
| AF-A0A1D6K0J9-F1-model_v4 | 21 | 273 | 30 | 318 | 0.5519 |
0.7015 |
| AF-Q10MH1-F1-model_v4 | 21 | 273 | 30 | 309 | 0.5493 |
0.6877 |
| AF-I1L7N4-F1-model_v4 | 19 | 273 | 27 | 306 | 0.5474 |
0.6813 |
| AF-I1JBE8-F1-model_v4 | 19 | 273 | 59 | 341 | 0.5344 |
0.6879 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Y0MMM1-F1-model_v4 | CBM0 | 18 | 273 | 1 | 227 | 0.7514 |
0.842 |
| A0A0D8DBQ6 | CBM9 | 18 | 271 | 4 | 230 | 0.7496 |
0.8417 |
| AF-A0A0M4HRA5-F1-model_v4 | CBM0 | 18 | 273 | 2 | 231 | 0.7407 |
0.8318 |
| AF-A0A7T0WJH8-F1-model_v4 | CBM0 | 23 | 272 | 1 | 229 | 0.7328 |
0.8146 |
| AF-A0A411EA81-F1-model_v4 | CBM0 | 14 | 271 | 15 | 244 | 0.729 |
0.8326 |
| AF-A0A0A7LU57-F1-model_v4 | CBM0 | 10 | 273 | 10 | 246 | 0.7284 |
0.8193 |
| A0A3B9R5X0 | CBM0 | 15 | 271 | 16 | 244 | 0.7284 |
0.8355 |
| AF-W8VW59-F1-model_v4 | CBM0 | 23 | 271 | 18 | 239 | 0.7265 |
0.8476 |
| AF-A0A7H9ASC5-F1-model_v4 | CBM0 | 14 | 271 | 15 | 244 | 0.7265 |
0.8297 |
| AF-A0A290S1T2-F1-model_v4 | CBM0 | 17 | 273 | 10 | 242 | 0.7248 |
0.8155 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0D8DBQ6 | CBM9 | 18 | 271 | 4 | 230 | 0.7496 |
0.8417 |
| A0A2A2W655 | CBM9 | 16 | 273 | 22 | 226 | 0.7026 |
0.863 |
| UYQ93496.1 | CBM9 | 18 | 271 | 36 | 260 | 0.7018 |
0.8427 |
| A0A1M5Y1N3 | CBM9 | 17 | 271 | 23 | 246 | 0.698 |
0.8218 |
| B8DZ52 | CBM9 | 20 | 273 | 26 | 250 | 0.6826 |
0.8125 |
| UVI31563.1 | CBM9 | 21 | 271 | 2 | 200 | 0.665 |
0.7896 |
| A0A840SAJ4 | CBM9 | 21 | 273 | 49 | 261 | 0.6594 |
0.8357 |
| A0A2E7FMT0 | CBM9 | 17 | 271 | 26 | 248 | 0.6528 |
0.7737 |
| BDC52011.1 | CBM9 | 21 | 271 | 27 | 248 | 0.6505 |
0.7757 |
| BCY18704.1 | CBM9 | 20 | 271 | 56 | 271 | 0.6399 |
0.8146 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1i8u-assembly1.cif.gz_A | 25 | 271 | 1 | 189 | 0.7412 |
0.8927 |
| 7nwo-assembly1.cif.gz_AAA | 25 | 273 | 1 | 186 | 0.7324 |
0.8998 |
| 7nwq-assembly1.cif.gz_AAA | 25 | 273 | 1 | 186 | 0.7258 |
0.9012 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P60000-F1-model_v4 | 21 | 270 | 31 | 239 | 0.5722 |
0.7122 |
| AF-Q8GPG1-F1-model_v4 | 23 | 273 | 38 | 260 | 0.5616 |
0.6909 |
| AF-I3R9M7-F1-model_v4 | 24 | 273 | 35 | 248 | 0.5389 |
0.6982 |
| AF-Q60037-F1-model_v4 | 3 | 271 | 71 | 1059 | 0.4269 |
0.6948 |
| AF-Q60042-F1-model_v4 | 3 | 271 | 67 | 1055 | 0.4261 |
0.6929 |
| AF-P36917-F1-model_v4 | 8 | 273 | 763 | 1104 | 0.4113 |
0.6885 |
| AF-P38535-F1-model_v4 | 1 | 273 | 1 | 898 | 0.4098 |
0.6611 |
| AF-C6CRV0-F1-model_v4 | 14 | 273 | 852 | 1053 | 0.3751 |
0.8436 |