PROTEIN: HRGMv2_3865_1_6
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Protein File & Metadata
Source:
HRGMv2_3865_1_6.pdb
Genome ID:
Protein ID:
HRGMv2_3865_1_6
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Protein Sequence
MKTIIKNMVL GCFALSLLSA ITACSGDELP QPIKKPRTML TLTTDWTGVD KGEKPNSYVV 60 NINENQYTVE NGDNVYELKT NESYSISSYT FAENITITDS IAKVDASKTK VSSPTAINGL 120 PGTLYGTYSR IDKLEGATSA LSLKMKQLTH DLNVTISNDV SVNSGYAVLN GVASSVNLKT 180 GESSGSEDAV TEVRITTNAK GEQEITVPFR LLGLDKSATH TLTIYLSLAD GTSKTIVTDL 240 SSYLSNFGQT TAPLNIASGV ALSSIISGVN NWQVVNAGTI KL 282
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-I3YKC4-F1-model_v4 | GH28 | 34 | 281 | 31 | 274 | 0.4593 |
0.7694 |
| AF-A0A4V0ZPZ7-F1-model_v4 | GH18 | 23 | 282 | 18 | 311 | 0.4516 |
0.7272 |
| AF-A0A1X9Z4P5-F1-model_v4 | PL13 | 39 | 280 | 42 | 576 | 0.4038 |
0.6385 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I3YKC4 | GH28 | 34 | 281 | 31 | 274 | 0.4593 |
0.7694 |
| A0A4V0ZPZ7 | GH18 | 23 | 282 | 18 | 311 | 0.4516 |
0.7272 |
| D7J0Z9 | GH28 | 34 | 282 | 22 | 267 | 0.4154 |
0.6876 |
| A0A1X9Z4P5 | PL13 | 39 | 280 | 42 | 576 | 0.4038 |
0.6385 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5cag-assembly1.cif.gz_A | 29 | 267 | 11 | 278 | 0.6477 |
0.7808 |
| 3gf8-assembly1.cif.gz_A | 37 | 278 | 1 | 275 | 0.6298 |
0.7542 |
| 4qdg-assembly1.cif.gz_A | 35 | 278 | 4 | 295 | 0.6262 |
0.761 |
| 5nfi-assembly1.cif.gz_B | 36 | 277 | 1 | 272 | 0.6251 |
0.7426 |
| 3pay-assembly1.cif.gz_C | 35 | 276 | 4 | 297 | 0.6091 |
0.7531 |
| 3pay-assembly1.cif.gz_D | 35 | 276 | 5 | 303 | 0.6082 |
0.7587 |
| 3pay-assembly1.cif.gz_B | 35 | 276 | 5 | 299 | 0.6052 |
0.7509 |
| 3pay-assembly1.cif.gz_A | 35 | 276 | 5 | 292 | 0.5935 |
0.7297 |
| 4gpv-assembly1.cif.gz_A | 31 | 280 | 4 | 321 | 0.5895 |
0.7276 |
| 4gpv-assembly2.cif.gz_B | 33 | 279 | 4 | 321 | 0.5868 |
0.7336 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7MT55-F1-model_v4 | 32 | 279 | 27 | 294 | 0.6373 |
0.7647 |
| AF-A0PA81-F1-model_v4 | 32 | 279 | 27 | 294 | 0.6329 |
0.7596 |
| AF-A0PA72-F1-model_v4 | 32 | 279 | 27 | 294 | 0.6293 |
0.7574 |
| AF-A7LXW1-F1-model_v4 | 29 | 267 | 26 | 300 | 0.6117 |
0.7882 |
| AF-B2RHG2-F1-model_v4 | 31 | 278 | 35 | 315 | 0.5905 |
0.7319 |