PROTEIN: HRGMv2_3865_132_3
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Protein File & Metadata
Source:
HRGMv2_3865_132_3.pdb
Genome ID:
Protein ID:
HRGMv2_3865_132_3
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Protein Sequence
MNKPIVDFKI IKTLVLNNKK LFAATSCASF VVALVIAFSI PKEYTSTVVL APEASEGGLS 60 GNLGSLASMV GAKLGNMSNS DAVYPQLYPE ICASDDFIIP LWSLKVQSQD GSLSTTLYDY 120 VLKHRKTAWW NKIKQLMLLP FAPKPQAGAP VKQTQKTEAI QLTQEQENAT NAIKGMLKCV 180 VDKKTDMITI TTKAQDPLIA ATVADYVQRA LQTYIIKYRT TKARNDLSYT EKLYREAKVD 240 YDKSRQRYGS YSDANTDIIL QSYKLKQTDL ENDMQLKYNI YSQLAQQLQL ARAKVQERTP 300 AFTIIQSAVV PLKKASPRRG LIVGIILLLN FLGTLQWTYL KNKGAFKKQE DTPEPATGQE 360 M 361
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32IY2-F1-model_v4 | 4 | 348 | 25 | 367 | 0.5292 |
0.5849 |
| AF-P26266-F1-model_v4 | 5 | 348 | 26 | 367 | 0.5283 |
0.5859 |
| AF-Q9I1N4-F1-model_v4 | 6 | 353 | 5 | 494 | 0.5143 |
0.6938 |
| AF-Q0P8G9-F1-model_v4 | 29 | 329 | 28 | 349 | 0.4949 |
0.6113 |
| AF-K0EV96-F1-model_v4 | 2 | 353 | 1 | 207 | 0.4442 |
0.8151 |
| AF-K0EZX4-F1-model_v4 | 4 | 360 | 1 | 445 | 0.4332 |
0.4898 |
| AF-P76387-F1-model_v4 | 2 | 360 | 15 | 714 | 0.4302 |
0.5802 |
| AF-Q9F7B1-F1-model_v4 | 1 | 361 | 13 | 715 | 0.4261 |
0.5721 |
| AF-Q32HS6-F1-model_v4 | 1 | 358 | 14 | 717 | 0.4175 |
0.5659 |
| AF-P38134-F1-model_v4 | 1 | 357 | 14 | 715 | 0.413 |
0.561 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 1 | 361 | 21 | 766 | 0.415 |
0.6247 |
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 1 | 356 | 21 | 490 | 0.4096 |
0.6256 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 1 | 356 | 21 | 490 | 0.405 |
0.6183 |
| AF-A0A387H7L2-F1-model_v4 | GT0 | 1 | 361 | 23 | 767 | 0.404 |
0.6083 |
| A0A2L0WKS9 | GT0 | 1 | 361 | 22 | 771 | 0.4035 |
0.608 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 1 | 361 | 22 | 771 | 0.4035 |
0.608 |
| QTR45648.1 | GT4 | 2 | 360 | 81 | 1127 | 0.3772 |
0.5775 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 1 | 361 | 106 | 1125 | 0.3763 |
0.5735 |
| QNN05996.1 | GT4 | 1 | 361 | 7 | 755 | 0.3714 |
0.57 |
| WGH78710.1 | PL1_2 | 1 | 359 | 30 | 491 | 0.3521 |
0.541 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8p3o-assembly1.cif.gz_B | 4 | 345 | 1 | 332 | 0.5487 |
0.5911 |
| 7nhr-assembly1.cif.gz_G | 6 | 355 | 1 | 551 | 0.4646 |
0.5888 |
| 7nii-assembly1.cif.gz_H | 6 | 354 | 1 | 553 | 0.4473 |
0.569 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3K0S9-F1-model_v4 | 2 | 358 | 11 | 224 | 0.5709 |
0.7566 |
| AF-P59221-F1-model_v4 | 2 | 358 | 11 | 223 | 0.5706 |
0.7606 |
| AF-P0C0T8-F1-model_v4 | 2 | 358 | 11 | 223 | 0.5698 |
0.7592 |
| AF-Q04662-F1-model_v4 | 2 | 358 | 11 | 223 | 0.5693 |
0.7591 |
| AF-Q54519-F1-model_v4 | 1 | 356 | 8 | 223 | 0.561 |
0.7392 |
| AF-P32014-F1-model_v4 | 13 | 343 | 20 | 380 | 0.5519 |
0.6381 |
| AF-P22930-F1-model_v4 | 25 | 336 | 29 | 362 | 0.5335 |
0.6399 |
| AF-P26266-F1-model_v4 | 5 | 348 | 26 | 367 | 0.5283 |
0.5859 |
| AF-P62586-F1-model_v4 | 29 | 329 | 37 | 360 | 0.4815 |
0.5991 |
| AF-P62587-F1-model_v4 | 29 | 329 | 37 | 360 | 0.4772 |
0.5948 |