PROTEIN: HRGMv2_3860_5_15
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Protein File & Metadata
Source:
HRGMv2_3860_5_15.pdb
Genome ID:
Protein ID:
HRGMv2_3860_5_15
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Protein Sequence
MSNANDRRIA RNSAFLYGRM LITVAISLYT SRVVLDMLGV GDYGIYNVVG SIVTIFTFIN 60 GSMAGATQRF LNFAMGQGDS AKLRHTFSAS LLIHTCIALI ILVAGETIGL WWVNNKLVLE 120 PGRMYAANWA YQLSLVGCLF TVMQVPFVAS VIAHERMDVF AYITLLSTFL KLGIALMLIF 180 ACNTDTLIFY AWLMLAVIVI TFACYVVFAC RRFEECRITL RSPRTMIRAL IGFSLSDIFG 240 NLCYMLRLQS VAIILNRFGG TVLNAATGLN LTVSGTITQF GSTIISAFRP QIVQQYAAGD 300 YVYMQRLMIN CAKYSLLMIG LMAIPAILCM DTLLSLWLKE VPAYTADFCR LTLIAGAAEL 360 IVFTLNCGVH ATGRILHMSV TTGIIYLLEI PLMYFLLQLT RTPWIVYAIH IFIIAIIIVT 420 VGLILRELMP EFRFAAFLHR GVAAACLILA AAALPAWSVN YIVYGTWPSL CATTATSTIV 480 LGVSSWFLAI DDEMRASIKK RLMHR 505
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0PAV6-F1-model_v4 | 1 | 433 | 6 | 441 | 0.7972 |
0.8825 |
| AF-H9L497-F1-model_v4 | 4 | 504 | 3 | 485 | 0.7708 |
0.8174 |
| AF-A0A0R0I9X1-F1-model_v4 | 1 | 432 | 3 | 440 | 0.7694 |
0.8569 |
| AF-Q8CWT9-F1-model_v4 | 2 | 503 | 1 | 469 | 0.7691 |
0.8192 |
| AF-Q2G262-F1-model_v4 | 4 | 503 | 3 | 476 | 0.7673 |
0.8157 |
| AF-Q4DUB5-F1-model_v4 | 1 | 432 | 20 | 458 | 0.7644 |
0.875 |
| AF-A0A133CZZ9-F1-model_v4 | 4 | 504 | 13 | 544 | 0.763 |
0.8201 |
| AF-A0A0H3GSJ3-F1-model_v4 | 5 | 503 | 2 | 478 | 0.7622 |
0.8083 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 433 | 4 | 446 | 0.7599 |
0.8528 |
| AF-Q38956-F1-model_v4 | 1 | 432 | 25 | 476 | 0.7595 |
0.8914 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 501 | 1 | 511 | 0.7643 |
0.8013 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 501 | 36 | 545 | 0.7076 |
0.7628 |
| QJC17489.1 | GT2 | 1 | 505 | 215 | 846 | 0.6975 |
0.8804 |
| QNU38870.1 | GT4 | 4 | 505 | 1 | 479 | 0.6795 |
0.7928 |
| AF-F2NKF2-F1-model_v4 | GT4 | 3 | 497 | 1 | 490 | 0.6421 |
0.8534 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 505 | 2 | 758 | 0.6369 |
0.8144 |
| AF-D7BDH0-F1-model_v4 | GT4 | 4 | 497 | 1 | 521 | 0.6341 |
0.8335 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 8 | 505 | 1 | 567 | 0.6336 |
0.8069 |
| A0A4V3CWU6 | GT4 | 9 | 499 | 1 | 554 | 0.6334 |
0.8183 |
| AF-D1BIF1-F1-model_v4 | GT4 | 7 | 505 | 10 | 655 | 0.615 |
0.82 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 501 | 1 | 511 | 0.7643 |
0.8013 |
| A0A160T2N7 | GT28 | 1 | 501 | 36 | 545 | 0.7076 |
0.7628 |
| QJC17489.1 | GT2 | 1 | 505 | 215 | 846 | 0.6975 |
0.8804 |
| QNU38870.1 | GT4 | 4 | 505 | 1 | 479 | 0.6795 |
0.7928 |
| F2NKF2 | GT4 | 3 | 497 | 1 | 490 | 0.6421 |
0.8534 |
| A0A517Z2I8 | GT2 | 1 | 505 | 2 | 758 | 0.6369 |
0.8144 |
| D7BDH0 | GT4 | 4 | 497 | 1 | 521 | 0.6341 |
0.8335 |
| A0A2U8PPB3 | GT4 | 8 | 505 | 1 | 567 | 0.6336 |
0.8069 |
| A0A4V3CWU6 | GT4 | 9 | 499 | 1 | 554 | 0.6334 |
0.8183 |
| A0A3Q9G719 | GT4 | 3 | 504 | 1 | 589 | 0.6214 |
0.807 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7wag-assembly1.cif.gz_A | 3 | 498 | 1 | 513 | 0.7864 |
0.8332 |
| 7waw-assembly1.cif.gz_A | 15 | 495 | 1 | 496 | 0.7673 |
0.819 |
| 5y50-assembly1.cif.gz_A | 1 | 432 | 1 | 438 | 0.766 |
0.8569 |
| 4mlb-assembly1.cif.gz_C | 1 | 433 | 8 | 450 | 0.7578 |
0.8504 |
| 5xjj-assembly1.cif.gz_A | 1 | 432 | 2 | 439 | 0.7571 |
0.8477 |
| 6hfb-assembly3.cif.gz_C | 1 | 433 | 8 | 449 | 0.757 |
0.8487 |
| 6gwh-assembly1.cif.gz_A | 1 | 433 | 7 | 437 | 0.7495 |
0.8345 |
| 3wbn-assembly1.cif.gz_A | 1 | 433 | 6 | 448 | 0.748 |
0.8389 |
| 6z70-assembly1.cif.gz_A | 1 | 433 | 5 | 444 | 0.7416 |
0.8272 |
| 6ids-assembly1.cif.gz_A | 1 | 432 | 2 | 433 | 0.7403 |
0.8227 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 7 | 505 | 1 | 503 | 0.8275 |
0.8585 |
| AF-P58594-F1-model_v4 | 1 | 433 | 6 | 429 | 0.8014 |
0.8966 |
| AF-Q46378-F1-model_v4 | 1 | 503 | 1 | 534 | 0.7926 |
0.8391 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 504 | 1 | 539 | 0.7819 |
0.8343 |
| AF-Q7N1G0-F1-model_v4 | 1 | 433 | 2 | 447 | 0.7665 |
0.8596 |
| AF-Q71YH0-F1-model_v4 | 1 | 433 | 3 | 446 | 0.7663 |
0.8621 |
| AF-Q879Z5-F1-model_v4 | 1 | 433 | 25 | 465 | 0.7655 |
0.8715 |
| AF-Q8P4E6-F1-model_v4 | 1 | 433 | 9 | 453 | 0.7654 |
0.8626 |
| AF-Q9PA34-F1-model_v4 | 1 | 433 | 25 | 465 | 0.7647 |
0.8706 |
| AF-Q8PG07-F1-model_v4 | 1 | 433 | 9 | 453 | 0.7619 |
0.8589 |