PROTEIN: HRGMv2_3860_19_17
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Protein File & Metadata
Source:
HRGMv2_3860_19_17.pdb
Genome ID:
Protein ID:
HRGMv2_3860_19_17
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Protein Sequence
MIKVGLDQRI TNPVAMVRYL IKHPDVDLVW IYNGGKTAPV AETLPALTGD CSLSAVAEPQ 60 WGGIDLYIGP GAPGLEEAFL VNDSLKVIFT TDSAEIRNSL AAPAEIGLAE FNRKALVRGA 120 RVAYQPDVYT MLGALALMPL ARNLLLGDGI TGLMKLRSDN SAISPSPTPI ADNLLQPLRS 180 QVLGVLQTSF SAPLKFERLA DSMTVVYANV SVPTKMNFDD LLKIYHDFYD DHRHIVLLDS 240 VDICPEMVQG TNKTILSLSL AEDGRLNVKI EFDSLYKCGA GNALHLLNLL FGLDERIGF 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAA9-F1-model_v4 | 1 | 299 | 4 | 340 | 0.8361 |
0.9119 |
| AF-Q58496-F1-model_v4 | 1 | 299 | 1 | 334 | 0.835 |
0.904 |
| AF-Q9I5Q9-F1-model_v4 | 1 | 299 | 1 | 337 | 0.8334 |
0.9066 |
| AF-Q9PIS0-F1-model_v4 | 1 | 299 | 2 | 336 | 0.8256 |
0.8961 |
| AF-Q2G1H4-F1-model_v4 | 1 | 299 | 1 | 336 | 0.8227 |
0.8945 |
| AF-A0A0H3GH05-F1-model_v4 | 1 | 299 | 1 | 333 | 0.8224 |
0.8829 |
| AF-Q32AB7-F1-model_v4 | 1 | 299 | 1 | 333 | 0.8213 |
0.882 |
| AF-P11446-F1-model_v4 | 1 | 299 | 1 | 333 | 0.8211 |
0.8818 |
| AF-Q8ZKL8-F1-model_v4 | 1 | 299 | 1 | 333 | 0.821 |
0.8816 |
| AF-Q9CC15-F1-model_v4 | 1 | 299 | 4 | 340 | 0.8086 |
0.8849 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8afv-assembly2.cif.gz_D | 2 | 299 | 1 | 315 | 0.854 |
0.8965 |
| 8afv-assembly2.cif.gz_C | 2 | 299 | 1 | 320 | 0.853 |
0.9017 |
| 8afv-assembly1.cif.gz_B | 2 | 299 | 1 | 324 | 0.848 |
0.9017 |
| 8afu-assembly2.cif.gz_B | 1 | 299 | 6 | 333 | 0.8437 |
0.9049 |
| 8afu-assembly2.cif.gz_A-2 | 1 | 299 | 5 | 338 | 0.8374 |
0.9041 |
| 8afv-assembly1.cif.gz_A | 2 | 299 | 1 | 333 | 0.8348 |
0.899 |
| 1vkn-assembly1.cif.gz_C | 1 | 299 | 1 | 329 | 0.8329 |
0.8961 |
| 1vkn-assembly1.cif.gz_D | 1 | 299 | 1 | 328 | 0.8309 |
0.8934 |
| 1xyg-assembly1.cif.gz_D | 1 | 299 | 2 | 338 | 0.8275 |
0.9014 |
| 2cvo-assembly1.cif.gz_C | 1 | 299 | 5 | 341 | 0.8269 |
0.9038 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A8Z5X3-F1-model_v4 | 1 | 299 | 1 | 318 | 0.8693 |
0.918 |
| AF-A6L849-F1-model_v4 | 1 | 299 | 1 | 315 | 0.867 |
0.9131 |
| AF-Q5LHZ1-F1-model_v4 | 1 | 299 | 1 | 315 | 0.8662 |
0.9119 |
| AF-A0M376-F1-model_v4 | 1 | 299 | 1 | 314 | 0.8659 |
0.911 |
| AF-A6KXY5-F1-model_v4 | 1 | 299 | 1 | 315 | 0.8657 |
0.9114 |
| AF-Q8A1A7-F1-model_v4 | 1 | 299 | 1 | 315 | 0.8656 |
0.9114 |
| AF-Q64YZ5-F1-model_v4 | 1 | 299 | 1 | 315 | 0.8655 |
0.9112 |
| AF-A5FEC6-F1-model_v4 | 1 | 299 | 1 | 318 | 0.8651 |
0.9157 |
| AF-B6YQY8-F1-model_v4 | 1 | 299 | 1 | 311 | 0.8542 |
0.8951 |
| AF-B1GYR2-F1-model_v4 | 1 | 299 | 1 | 339 | 0.8422 |
0.9092 |