PROTEIN: HRGMv2_3850_89_2
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Protein File & Metadata
Source:
HRGMv2_3850_89_2.pdb
Genome ID:
Protein ID:
HRGMv2_3850_89_2
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Protein Sequence
MKNVHNESFM IRSLKASVSP SGICRYGKTF SWLQLSFLFM FLTSCLMAPF TMSFLKMDRF 60 SLKLVMPAAL SAVNDRFAEQ LNGIQIRNGK LTGGQRFDQI EEGNHLLAVD MEHEWKPNGE 120 NGRLRVKGYD NAVIFQPDRL IITDQNGMGF SVRYGKADAR LTDPGVYETE AVIGQLWLAQ 180 YKPMIMMLGC AVIFLIQLFF TAVLAGGIWM AKLSKMIDIA SCKEAASAAI CASALPAFAA 240 AAIGLIRFDL ITVLMVHTCG VTLMIAFLFR YMAKTRRHNE NVHSGGRHDK SAVV 294
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132ZFQ3-F1-model_v4 | 6 | 279 | 1 | 270 | 0.7926 |
0.8518 |
| AF-P59204-F1-model_v4 | 4 | 283 | 1 | 266 | 0.7649 |
0.828 |
| AF-A0A132Z3C4-F1-model_v4 | 4 | 284 | 1 | 267 | 0.5377 |
0.5862 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 287 | 3 | 276 | 0.7706 |
0.8273 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 287 | 3 | 276 | 0.7706 |
0.8273 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O06992-F1-model_v4 | 1 | 294 | 1 | 294 | 0.9027 |
0.9233 |
| AF-Q99ZB6-F1-model_v4 | 1 | 276 | 1 | 271 | 0.8117 |
0.8671 |
| AF-P59204-F1-model_v4 | 4 | 283 | 1 | 266 | 0.7649 |
0.828 |
| AF-P59203-F1-model_v4 | 4 | 280 | 1 | 264 | 0.7632 |
0.8315 |
| AF-P54485-F1-model_v4 | 7 | 290 | 1 | 255 | 0.5528 |
0.6167 |