PROTEIN: HRGMv2_3834_52_2
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Protein File & Metadata
Source:
HRGMv2_3834_52_2.pdb
Genome ID:
Protein ID:
HRGMv2_3834_52_2
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Protein Sequence
MSELSLTTSP RKSMPRNARP VARQESLVQG DHWRFTVLTD SLIRVEWSDS GVFEDHCTQM 60 VVDRDFEPAA DIHMRQYEQD GLLVIDTPDV RLTYDRKPFT KEGLQITPKG MDGFCSTWHF 120 GDDQHANLGG TARTLDGVDG STEIGVGLNS PDGWSIIDDS ATNILVMPDD PAYPQAMQGL 180 QGIGIAPRA 189
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1CYL0-F1-model_v4 | 9 | 189 | 1 | 361 | 0.4806 |
0.8225 |
| AF-A0A0D2DLF9-F1-model_v4 | 10 | 189 | 2 | 361 | 0.4767 |
0.8226 |
| AF-A0A175W942-F1-model_v4 | 8 | 188 | 1 | 354 | 0.4708 |
0.8064 |
| AF-Q8DR83-F1-model_v4 | 25 | 187 | 1 | 337 | 0.4364 |
0.8052 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1L5KUR1-F1-model_v4 | GH31 | 8 | 189 | 1 | 196 | 0.7496 |
0.9042 |
| AF-A0A5B9E1R5-F1-model_v4 | GH31 | 13 | 189 | 26 | 196 | 0.6126 |
0.8574 |
| AF-D2Q7H7-F1-model_v4 | GH31 | 4 | 189 | 1 | 184 | 0.5217 |
0.8872 |
| AF-E5AAQ8-F1-model_v4 | GH31 | 7 | 189 | 1 | 357 | 0.5201 |
0.8186 |
| AF-M4RTP3-F1-model_v4 | GH31 | 5 | 189 | 7 | 189 | 0.5194 |
0.8892 |
| AF-A0A261G2K2-F1-model_v4 | GH31 | 3 | 189 | 1 | 182 | 0.5147 |
0.8838 |
| AF-A0A0M3T8X9-F1-model_v4 | GH31 | 6 | 189 | 1 | 196 | 0.5145 |
0.8756 |
| AF-A0A2K9BB82-F1-model_v4 | GH31 | 6 | 189 | 1 | 196 | 0.5143 |
0.8752 |
| AF-A0A133L380-F1-model_v4 | GH31 | 6 | 189 | 1 | 196 | 0.5141 |
0.8749 |
| AF-A0A0A1GLX9-F1-model_v4 | GH31 | 2 | 189 | 4 | 191 | 0.514 |
0.8546 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6B8LQ72 | GH31 | 7 | 189 | 31 | 211 | 0.5104 |
0.894 |
| Q8G4P4 | GH31 | 8 | 189 | 53 | 232 | 0.5057 |
0.8831 |
| A0A3D8TA88 | GH31 | 5 | 189 | 11 | 221 | 0.5017 |
0.8636 |
| E6K1W9 | GH31 | 9 | 189 | 26 | 233 | 0.4992 |
0.8747 |
| W5IGP0 | GH31 | 6 | 189 | 5 | 195 | 0.4969 |
0.8482 |
| A0A2W1X454 | GH31_15 | 1 | 189 | 1 | 382 | 0.4925 |
0.8137 |
| A0A6N7TVK1 | GH31 | 22 | 189 | 1 | 165 | 0.4834 |
0.9109 |
| A0A2S0KP15 | GH31 | 10 | 188 | 1 | 352 | 0.482 |
0.8302 |
| B6QBZ1 | GH31 | 9 | 188 | 1 | 362 | 0.481 |
0.825 |
| D4KJF7 | GH31 | 9 | 188 | 2 | 356 | 0.4801 |
0.825 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7wj9-assembly1.cif.gz_A | 23 | 188 | 4 | 346 | 0.4314 |
0.7825 |
| 7wjc-assembly1.cif.gz_A | 24 | 188 | 1 | 342 | 0.4312 |
0.7856 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.