PROTEIN: HRGMv2_3789_4_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3789_4_8.pdb
Genome ID:
Protein ID:
HRGMv2_3789_4_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MDSDSSPGID EPGYGDRLVV VALTLLLGGG VVALVGQHTA AQAGPAIVLS LLLAALGTGP 60 LLYCLHVLNQ QRPAADGLHG VVRDCWGGVP AVLLGGALLL ELVVTAAGVA QSVANHLHVL 120 LAGCGIEASN GMPGQLMAAA SLLLLAVVGL LRPHRVVLVA CVLLTVKVGA GLLLLVLAAR 180 HVHYAYWIPW LPPATAPYRF GIGGVLAASV PLYGVFATVG LALGFPGIGR QARARPPLLP 240 ACVLLAMVLL IVLAALQAGL VEFPALASTR PLSVALQHHP QLYWVMPLLP LAGVAGLVAL 300 ILVLLMLAAR VAMQLWPTAG DRSLEFRERL VPVAVVLSAA LLALWAPMGS LPVLPGPATL 360 LVMGAVCVAV LRGRAPRSRA LPVLAPVAIA LCLLAAVERM RVWPG 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32BH2-F1-model_v4 | 1 | 405 | 1 | 408 | 0.8164 |
0.844 |
| AF-A0A0H3H3G8-F1-model_v4 | 1 | 405 | 1 | 408 | 0.816 |
0.8437 |
| AF-P0AAD2-F1-model_v4 | 1 | 405 | 1 | 408 | 0.8153 |
0.8429 |
| AF-Q8ZLT5-F1-model_v4 | 1 | 405 | 1 | 408 | 0.8148 |
0.8425 |
| AF-P23173-F1-model_v4 | 4 | 405 | 1 | 409 | 0.8141 |
0.8494 |
| AF-A0A0R0G1E9-F1-model_v4 | 6 | 405 | 1 | 415 | 0.8141 |
0.858 |
| AF-A0A077Z938-F1-model_v4 | 5 | 405 | 1 | 409 | 0.8136 |
0.8507 |
| AF-A0A132Z694-F1-model_v4 | 8 | 405 | 5 | 418 | 0.8116 |
0.8765 |
| AF-Q2FYJ4-F1-model_v4 | 8 | 405 | 6 | 416 | 0.8087 |
0.8719 |
| AF-P44768-F1-model_v4 | 6 | 405 | 1 | 412 | 0.8073 |
0.8631 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q9PBD6 | GH23 | 4 | 405 | 18 | 450 | 0.7927 |
0.8779 |
| A0A6L9JN67 | GH13_3 | 1 | 405 | 6 | 441 | 0.7744 |
0.8447 |
| AF-A0A7G5J8Y7-F1-model_v4 | GH43_26 | 8 | 405 | 15 | 459 | 0.6064 |
0.8524 |
| AF-A0A1Y6LTJ7-F1-model_v4 | GH43_21 | 6 | 405 | 56 | 498 | 0.5958 |
0.8359 |
| AF-A0A4D6NR01-F1-model_v4 | GT1 | 3 | 405 | 12 | 444 | 0.5824 |
0.7971 |
| A0A6M7ZRF1 | GH35 | 1 | 405 | 17 | 485 | 0.5485 |
0.8613 |
| A0A6M7ZQI8 | CE3 | 8 | 405 | 1109 | 1557 | 0.53 |
0.8671 |
| A0A6B9YP25 | GH171 | 8 | 405 | 45 | 526 | 0.4795 |
0.7589 |
| E8X1W4 | GH171 | 6 | 405 | 51 | 549 | 0.4707 |
0.7547 |
| A0A8F3AH03 | CBM48 | 1 | 405 | 2266 | 2710 | 0.4567 |
0.8042 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q9PBD6 | GH23 | 4 | 405 | 18 | 450 | 0.7927 |
0.8779 |
| A0A6L9JN67 | GH13_3 | 1 | 405 | 6 | 441 | 0.7744 |
0.8447 |
| A0A7G5J8Y7 | GH43_26 | 8 | 405 | 15 | 459 | 0.6064 |
0.8524 |
| A0A1Y6LTJ7 | GH43_21 | 6 | 405 | 56 | 498 | 0.5958 |
0.8359 |
| A0A4D6NR01 | GT1 | 3 | 405 | 12 | 444 | 0.5824 |
0.7971 |
| A0A6M7ZRF1 | GH35 | 1 | 405 | 17 | 485 | 0.5485 |
0.8613 |
| A0A6M7ZQI8 | CE3 | 8 | 405 | 1109 | 1557 | 0.53 |
0.8671 |
| UFH52671.1 | CE19 | 8 | 405 | 40 | 453 | 0.5274 |
0.7637 |
| A0A8S2AWG3 | GT2 | 1 | 405 | 33 | 480 | 0.5221 |
0.7856 |
| A0A1G7JLW0 | GH171 | 9 | 405 | 41 | 455 | 0.4907 |
0.7656 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5j4i-assembly1.cif.gz_A | 8 | 405 | 1 | 408 | 0.8054 |
0.8665 |
| 3ob6-assembly1.cif.gz_B | 8 | 405 | 1 | 408 | 0.8035 |
0.864 |
| 3ob6-assembly1.cif.gz_A | 8 | 405 | 1 | 402 | 0.8033 |
0.8591 |
| 3gia-assembly1.cif.gz_A | 8 | 405 | 1 | 401 | 0.7896 |
0.8469 |
| 3gi8-assembly1.cif.gz_C | 4 | 405 | 1 | 403 | 0.7889 |
0.8401 |
| 3ncy-assembly2.cif.gz_D | 13 | 405 | 1 | 392 | 0.788 |
0.8445 |
| 3ncy-assembly1.cif.gz_A | 13 | 405 | 1 | 393 | 0.7874 |
0.8445 |
| 3gi9-assembly1.cif.gz_C | 4 | 405 | 1 | 402 | 0.7857 |
0.8387 |
| 3ncy-assembly1.cif.gz_B | 13 | 405 | 1 | 392 | 0.7853 |
0.8425 |
| 3lrc-assembly1.cif.gz_A | 9 | 405 | 1 | 387 | 0.7851 |
0.8425 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AAD2-F1-model_v4 | 1 | 405 | 1 | 408 | 0.8153 |
0.8429 |
| AF-P0AAD3-F1-model_v4 | 1 | 405 | 1 | 408 | 0.8152 |
0.8429 |
| AF-Q8XB33-F1-model_v4 | 5 | 405 | 1 | 409 | 0.8151 |
0.8524 |
| AF-P23173-F1-model_v4 | 4 | 405 | 1 | 409 | 0.8141 |
0.8494 |
| AF-P28785-F1-model_v4 | 2 | 405 | 1 | 412 | 0.8121 |
0.8453 |
| AF-Q47825-F1-model_v4 | 5 | 405 | 1 | 410 | 0.8087 |
0.8475 |
| AF-P44768-F1-model_v4 | 6 | 405 | 1 | 412 | 0.8073 |
0.8631 |
| AF-P0AAF1-F1-model_v4 | 7 | 405 | 3 | 413 | 0.807 |
0.8676 |
| AF-P60065-F1-model_v4 | 4 | 405 | 1 | 412 | 0.8068 |
0.8667 |
| AF-P60061-F1-model_v4 | 4 | 405 | 1 | 412 | 0.8067 |
0.8666 |