PROTEIN: HRGMv2_3786_76_4
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3786_76_4.pdb
Genome ID:
Protein ID:
HRGMv2_3786_76_4
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MADYFTNKIE MPPNGIFIGS GVYGHKGDIL CGGRCFSYWV APDAPKHDVI VKLCVEENQG 60 NMLQFWAKGE DLWNLMQQAK AEGLYSVAFY ADADEATSKK FKELGASYLG YDFGERFSMG 120 LYSGSTSVDS DMTPEQAQKA DLQTAADIFI KKVKDWVDFR HSGDWGLVMA TSANFYIDYE 180 IAAGVEVPCT EDFPFGNLTT ASALNRGLFR SFNLPIWGSH LAHEWYSYLP HKNPHKMETL 240 KTAMYLKYMT GAKMIINESG NWALQSSLCE DSPMQTMPRA TDKLSEKVPD EARAQLVKDA 300 EKLFVNIGHR SPVAVEYRKI ISDFYDYTKA NPAPAGQPEA TIGIAKGNLD LSSGAPAYNG 360 AIAAAYNIAK FNPNWVPGAP EEGFKILENV LFPKPKMFLP HKNLHFGATP YGQADVVSFV 420 NDNVTADFLI NNYRVLIFAG WNTCSEKQYK VLTEYVKAGG KLCIAMPHLS TDKTRRHDSF 480 ELEDLVNGGD FSELCGLKVK GKGSRFYWAT GPSRKINDMG LMLARRLGII AAPLGELEYT 540 NPSDCYEMLA VDDENMRPVI VRCKSGKGEV YFVNTWCYPG ALNLNNGAGS FDDDRGLMDY 600 LFEYAAMQGR GHVWITGDDF EKPDADCKWI IFSYFPDAGK VCFLNLDYDN PHKCVLHYFG 660 DKKFITLQPG EFMQIEAPVL YPYEKYNQR 689
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 7 | 679 | 5 | 685 | 0.6708 |
0.6987 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A8M9Q3-F1-model_v4 | GH42 | 11 | 679 | 1 | 715 | 0.6825 |
0.7279 |
| AF-A0A089KT03-F1-model_v4 | GH42 | 10 | 679 | 1 | 664 | 0.6808 |
0.7066 |
| AF-A0A5K7S4H4-F1-model_v4 | GH164 | 10 | 677 | 1 | 647 | 0.6793 |
0.7144 |
| AF-F8A1Z2-F1-model_v4 | GH42 | 1 | 686 | 1 | 679 | 0.6757 |
0.6955 |
| AF-A0A6G7Z1M3-F1-model_v4 | GH42 | 1 | 684 | 1 | 680 | 0.6755 |
0.6951 |
| AF-A0A3G3JXW9-F1-model_v4 | GH42 | 1 | 679 | 1 | 690 | 0.6751 |
0.6995 |
| AF-A0A4P6F715-F1-model_v4 | GH42 | 5 | 679 | 6 | 660 | 0.6749 |
0.7075 |
| AF-A0A1H1NYN4-F1-model_v4 | GH42 | 1 | 679 | 8 | 687 | 0.6749 |
0.6974 |
| AF-A0A222X6N2-F1-model_v4 | GH42 | 1 | 684 | 1 | 677 | 0.6748 |
0.6965 |
| AF-A0A7T0LKF2-F1-model_v4 | GH42 | 8 | 680 | 1 | 703 | 0.6744 |
0.7112 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QYY35048.1 | GH42 | 1 | 678 | 1 | 699 | 0.6889 |
0.719 |
| A8M9Q3 | GH42 | 11 | 679 | 1 | 715 | 0.6825 |
0.7279 |
| A0A517YQ02 | GH42 | 6 | 679 | 3 | 683 | 0.6813 |
0.707 |
| A0A455T8W4 | GH42 | 1 | 679 | 1 | 678 | 0.6798 |
0.6991 |
| A0A6B8RR31 | GH42 | 10 | 681 | 1 | 710 | 0.6772 |
0.7162 |
| A0A8I0KPY9 | GH42 | 17 | 680 | 1 | 655 | 0.6766 |
0.7062 |
| A0A3Q9BJJ6 | GH42 | 9 | 684 | 1 | 668 | 0.6764 |
0.7008 |
| B7B5K3 | GH164 | 5 | 679 | 23 | 672 | 0.6761 |
0.7213 |
| B5YCK5 | GH42 | 7 | 677 | 1 | 683 | 0.6748 |
0.7024 |
| A0A1H2H7C8 | GH42 | 7 | 678 | 4 | 669 | 0.6743 |
0.7001 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7oms-assembly1.cif.gz_AAA | 3 | 678 | 2 | 655 | 0.6825 |
0.7165 |
| 6t6g-assembly2.cif.gz_EEE | 6 | 678 | 1 | 650 | 0.6824 |
0.7173 |
| 6t5o-assembly1.cif.gz_AAA | 1 | 678 | 1 | 658 | 0.6823 |
0.7137 |
| 6t75-assembly1.cif.gz_AAA | 1 | 678 | 1 | 657 | 0.6821 |
0.714 |
| 6t6g-assembly1.cif.gz_AAA | 3 | 678 | 3 | 655 | 0.6817 |
0.7163 |
| 6t75-assembly1.cif.gz_BBB | 6 | 678 | 1 | 648 | 0.6815 |
0.7176 |
| 7omi-assembly2.cif.gz_FFF | 6 | 678 | 1 | 650 | 0.6808 |
0.7154 |
| 6t7g-assembly1.cif.gz_CCC | 3 | 679 | 1 | 654 | 0.68 |
0.7134 |
| 7oms-assembly2.cif.gz_DDD | 5 | 679 | 2 | 650 | 0.6791 |
0.7154 |
| 6t6g-assembly2.cif.gz_DDD | 5 | 678 | 6 | 655 | 0.6787 |
0.716 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D5JGG0-F1-model_v4 | 7 | 680 | 1 | 665 | 0.6667 |
0.6922 |
| AF-C7ASJ5-F1-model_v4 | 1 | 678 | 27 | 694 | 0.6607 |
0.696 |
| AF-D9SM34-F1-model_v4 | 16 | 679 | 1 | 659 | 0.6593 |
0.6877 |
| AF-O07012-F1-model_v4 | 16 | 679 | 1 | 672 | 0.6582 |
0.6878 |
| AF-P94804-F1-model_v4 | 16 | 680 | 1 | 656 | 0.6502 |
0.6827 |
| AF-Q93GI5-F1-model_v4 | 1 | 677 | 1 | 691 | 0.6442 |
0.6716 |
| AF-B9LW38-F1-model_v4 | 16 | 679 | 1 | 691 | 0.6405 |
0.6819 |
| AF-D4QFE7-F1-model_v4 | 1 | 677 | 2 | 689 | 0.6404 |
0.6669 |
| AF-P22795-F1-model_v4 | 11 | 684 | 1 | 592 | 0.6112 |
0.6724 |