PROTEIN: HRGMv2_3780_16_8
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Protein File & Metadata
Source:
HRGMv2_3780_16_8.pdb
Genome ID:
Protein ID:
HRGMv2_3780_16_8
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Protein Sequence
MTDIRNTPPP FPQGEPRFVE ALRRKPEFRP YWNRNLEPRK DEADFRKGLD FRAEFPDPEE 60 LLVTATEEML RFLREADIFV PGATSIITRK AGNLEGESFR IVVERDQITI EAGDTEGIRR 120 GVYYLEDLLA GSRAPFLKLG ETRRDPWLKN RISRCFFGPI KRPPFNRDEL MDEIDYYPEE 180 YLNRLAREGV NGLWLTIVFR EICTTSFYPR NPDAERRLEK LRRSVRKCRR YGIKIWVFCI 240 EPACWGAANP CPEGHPELKG PPSYVGPSFC PDSDAAKQYL YECTNSLFAA VPDLGGLITI 300 SHGERPTSCL STLSVYGHKK NPCEGKCDLS IGEILSRVLL PMADGMHAAN PNAELISWLY 360 MPYRDQLSGW IYEMPERLTK DVILAFNFES GCNKEQLGKV RSGGDYWLSC VGPSDRFGRM 420 AAAARGRCEM AAKLQVCCSH EVATIPFLPV PGLIYRKYRE MKKLGVRHVI QCWYFGNYPG 480 LMNKAAGLLA FEDFTRPEKE FLEELAFSEW GAHAEDMAEI WNDFAEAYSN YPLDIQFQYY 540 GPMHDGPVWP LHLKQVMKQL PRTWKPDYAP AGDAVGECMF NHELPETMLL TRKIADGWHK 600 GMEKLNTFVR EYLDRSERML DASLYEALDI QFRSGANILE FYTLRNRLMD SPPDAEKLLD 660 RLEAIVKEEI ENSLRLAELC EADSRLGYHS EAEVYKYFPE KLRWRVAVLQ DILAEDFAGC 720 RIKLREGAPA GDFLRKQEKI HTAGSVYHAG NISWSMTADI ENVVFDIECR RNDSRGENGK 780 ISLFLMDRKG ERTPWRICID NNDTVFGSWD AVHVESKEEN GCRKIAAVFP RAMIGNNEFY 840 FGIEHCWNDA QGVHSEHYPA GNYPDEQRLN LGTFSPDRMV LVRI 884
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CY65-F1-model_v4 | 48 | 879 | 1 | 626 | 0.5924 |
0.7032 |
| AF-E7EYP9-F1-model_v4 | 56 | 866 | 35 | 715 | 0.5884 |
0.7079 |
| AF-Q9VLL5-F1-model_v4 | 56 | 866 | 47 | 726 | 0.5808 |
0.7088 |
| AF-Q9FNA3-F1-model_v4 | 55 | 866 | 39 | 774 | 0.5793 |
0.6683 |
| AF-K7LI90-F1-model_v4 | 55 | 866 | 38 | 770 | 0.5783 |
0.6713 |
| AF-A0A077Z8P6-F1-model_v4 | 33 | 716 | 153 | 770 | 0.5156 |
0.6828 |
| AF-A0A1C1CFU8-F1-model_v4 | 30 | 809 | 22 | 932 | 0.5013 |
0.602 |
| AF-A0A175VX87-F1-model_v4 | 30 | 809 | 26 | 955 | 0.4954 |
0.6017 |
| AF-A0A158Q6A2-F1-model_v4 | 31 | 740 | 266 | 944 | 0.4361 |
0.6224 |
| AF-A0A3P7DBX8-F1-model_v4 | 31 | 865 | 307 | 1029 | 0.4338 |
0.6073 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0D5NGQ8-F1-model_v4 | GH20 | 39 | 732 | 22 | 633 | 0.6238 |
0.758 |
| AF-A0A7S7NL07-F1-model_v4 | GH20 | 39 | 790 | 32 | 665 | 0.6198 |
0.7477 |
| AF-A0A6I6GMG5-F1-model_v4 | GH138 | 49 | 883 | 9 | 876 | 0.6173 |
0.664 |
| AF-A0A7G5XJL5-F1-model_v4 | GH138 | 48 | 884 | 17 | 869 | 0.6159 |
0.6639 |
| AF-A0A7X9SA48-F1-model_v4 | GH138 | 46 | 884 | 19 | 898 | 0.6151 |
0.6691 |
| AF-A0A4P7VZC2-F1-model_v4 | GH138 | 45 | 882 | 21 | 895 | 0.6149 |
0.6664 |
| AF-Q8A920-F1-model_v4 | GH138 | 52 | 882 | 1 | 871 | 0.6135 |
0.6623 |
| AF-D6D5Z8-F1-model_v4 | GH138 | 46 | 884 | 19 | 890 | 0.6116 |
0.6633 |
| AF-A0A679H7Z9-F1-model_v4 | GH138 | 46 | 882 | 19 | 897 | 0.6113 |
0.6637 |
| AF-A0A0P0FQE2-F1-model_v4 | GH138 | 45 | 882 | 19 | 897 | 0.611 |
0.663 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A068NJZ0 | GH163 | 36 | 734 | 8 | 582 | 0.6281 |
0.7724 |
| A0A0D5NGQ8 | GH20 | 39 | 732 | 22 | 633 | 0.6238 |
0.758 |
| A0A7S7NL07 | GH20 | 39 | 790 | 32 | 665 | 0.6198 |
0.7477 |
| A0A5J6SXV5 | GH163 | 38 | 871 | 3 | 623 | 0.6191 |
0.7365 |
| WCJ58494.1 | GH163 | 40 | 717 | 5 | 585 | 0.6164 |
0.7532 |
| A0A7X9SA48 | GH138 | 46 | 884 | 19 | 898 | 0.6151 |
0.6691 |
| A0A5P2G1P4 | GH138 | 34 | 884 | 19 | 917 | 0.6113 |
0.6629 |
| A0A5B9ED23 | GH138 | 48 | 884 | 29 | 873 | 0.6093 |
0.6587 |
| A0A4P6PAS5 | GH115 | 36 | 872 | 9 | 664 | 0.6085 |
0.7147 |
| A0A396M876 | GH20 | 28 | 791 | 20 | 696 | 0.6082 |
0.7101 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6hze-assembly2.cif.gz_B | 49 | 884 | 1 | 849 | 0.622 |
0.6621 |
| 6hzf-assembly2.cif.gz_B | 50 | 884 | 1 | 845 | 0.6201 |
0.6583 |
| 6hze-assembly1.cif.gz_A | 49 | 883 | 1 | 859 | 0.6184 |
0.6599 |
| 6hzf-assembly1.cif.gz_A | 49 | 884 | 1 | 852 | 0.6183 |
0.6598 |
| 6hzg-assembly1.cif.gz_A | 48 | 737 | 1 | 694 | 0.6132 |
0.7011 |
| 2epo-assembly1.cif.gz_A | 50 | 879 | 1 | 626 | 0.5937 |
0.7048 |
| 1l8n-assembly1.cif.gz_A-2 | 20 | 662 | 1 | 671 | 0.5926 |
0.7078 |
| 5a6j-assembly3.cif.gz_D | 46 | 879 | 1 | 609 | 0.5919 |
0.7098 |
| 5ac5-assembly1.cif.gz_A | 49 | 879 | 1 | 625 | 0.5914 |
0.7026 |
| 2epn-assembly1.cif.gz_B | 49 | 879 | 1 | 623 | 0.5913 |
0.7029 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9FNA3-F1-model_v4 | 55 | 866 | 39 | 774 | 0.5793 |
0.6683 |
| AF-P49008-F1-model_v4 | 26 | 884 | 28 | 777 | 0.5099 |
0.5728 |