PROTEIN: HRGMv2_3754_162_14
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Protein File & Metadata
Source:
HRGMv2_3754_162_14.pdb
Genome ID:
Protein ID:
HRGMv2_3754_162_14
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Protein Sequence
MKVLKAQMTS NILRRAALCS LLAAGATLGA VSAADTTTTV PVTTAATTAT TTAATTVATA 60 GTTPGNGTGI VTSRISQSAP PVTNKALRQV SNDAMRDAVT IVAPDANAYY NRLSVTVTPV 120 SITADRLHIT YPKVTSVSPV VTLAMNKTIE SYVRQVQDNL AKTNAPGKNM ENLYLTYDIK 180 ADDNGIFSVL LKSYTIADGA ANGSNTVKAF TFNTSDGRLL HLSDFGSVST DMINKALKTS 240 DGKWNTQVFA DYQGVKSVPS EFYADGAHNI TVIFQQGDIG PAASGTIYVP LGKIGR 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0C5WZV8-F1-model_v4 | CE4 | 83 | 296 | 14 | 228 | 0.4439 |
0.7481 |
| AF-A0A1C3S9P3-F1-model_v4 | CE4 | 31 | 296 | 18 | 237 | 0.4438 |
0.7131 |
| AF-A0A3T0KXR9-F1-model_v4 | CE4 | 114 | 296 | 44 | 239 | 0.4347 |
0.8436 |
| U6SKR9 | CE4 | 7 | 296 | 42 | 253 | 0.433 |
0.7331 |
| AF-A0A1L5LUB1-F1-model_v4 | CE4 | 9 | 296 | 16 | 250 | 0.4321 |
0.6674 |
| AF-A0A1W5ZRM2-F1-model_v4 | CE4 | 1 | 296 | 9 | 238 | 0.4279 |
0.6565 |
| AF-A9KQU7-F1-model_v4 | CE4 | 115 | 296 | 47 | 244 | 0.427 |
0.8295 |
| UOR11097.1 | CE4 | 1 | 296 | 3 | 229 | 0.4263 |
0.6583 |
| QSR02007.1 | CE4 | 114 | 296 | 44 | 240 | 0.4255 |
0.8218 |
| AF-A0A6G7XYA8-F1-model_v4 | CE4 | 18 | 296 | 28 | 236 | 0.4251 |
0.7276 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| U6SKR9 | CE4 | 7 | 296 | 42 | 253 | 0.433 |
0.7331 |
| A0A1W5ZRM2 | CE4 | 1 | 296 | 9 | 238 | 0.4279 |
0.6565 |
| A9KQU7 | CE4 | 115 | 296 | 47 | 244 | 0.427 |
0.8295 |
| UOR11097.1 | CE4 | 1 | 296 | 3 | 229 | 0.4263 |
0.6583 |
| QSR02007.1 | CE4 | 114 | 296 | 44 | 240 | 0.4255 |
0.8218 |
| A0A6G7XYA8 | CE4 | 18 | 296 | 28 | 236 | 0.4251 |
0.7276 |
| A0A941GFG8 | CE4 | 114 | 296 | 52 | 248 | 0.4206 |
0.8118 |
| A0A7I8CYH7 | CE4 | 111 | 296 | 53 | 247 | 0.4203 |
0.7895 |
| A0A9E3WX71 | CE4 | 114 | 296 | 49 | 244 | 0.4186 |
0.8102 |
| WHT47692.1 | CE4 | 1 | 296 | 33 | 266 | 0.4154 |
0.6536 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cyg-assembly3.cif.gz_B | 114 | 296 | 1 | 194 | 0.6387 |
0.8323 |
| 3cyg-assembly2.cif.gz_A | 111 | 296 | 2 | 203 | 0.6156 |
0.8319 |
| 5jen-assembly1.cif.gz_A | 114 | 296 | 1 | 205 | 0.6076 |
0.8234 |
| 5jen-assembly2.cif.gz_C | 111 | 296 | 1 | 198 | 0.6052 |
0.799 |
| 4e72-assembly1.cif.gz_A | 108 | 296 | 1 | 212 | 0.5925 |
0.7943 |
| 3s5t-assembly1.cif.gz_A-2 | 110 | 296 | 1 | 242 | 0.5704 |
0.8302 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.