PROTEIN: HRGMv2_3658_32_9
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Protein File & Metadata
Source:
HRGMv2_3658_32_9.pdb
Genome ID:
Protein ID:
HRGMv2_3658_32_9
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Protein Sequence
MGTAFLYIFI SAAFFAAQFI FIKTYQARTQ PGILSSIWSA ILNGGWKIVI FGIACGFQCA 60 FTVQSGLYAA GYAVSAIACS LATLHALKLG NLSTIVLYTL VGGNALPFVY SLLFTGAELT 120 FFCAAGFASM LLSFLPSVLS AKRQDAKTSE REAAAMKNPA APLAPANGHG KKYLFLLLCL 180 ITFFSNGLVS VFSDANAKAY SSGTGVDSSS FLVWSGLISI VLAGGIFCAA LIQQKVKTGR 240 GFLSILPVSV QNAGRRACRK RILFLMAVMG IYSVLNGLGN VFSLKAAEPP MQGAVQFPVL 300 NAAIMIFTPI FTRLVWKEKI ARSDMLGIGI AVVGLAFFLL DAIN 344
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P31125-F1-model_v4 | 1 | 344 | 1 | 292 | 0.7678 |
0.8604 |
| AF-Q0P881-F1-model_v4 | 1 | 344 | 4 | 298 | 0.7669 |
0.848 |
| AF-A0A0H3GPN1-F1-model_v4 | 1 | 344 | 1 | 293 | 0.766 |
0.8554 |
| AF-Q0PA30-F1-model_v4 | 3 | 344 | 1 | 289 | 0.7642 |
0.8522 |
| AF-Q56072-F1-model_v4 | 1 | 344 | 1 | 293 | 0.7619 |
0.8516 |
| AF-Q9I6P9-F1-model_v4 | 1 | 344 | 10 | 292 | 0.7608 |
0.8671 |
| AF-O33787-F1-model_v4 | 1 | 344 | 4 | 295 | 0.759 |
0.8517 |
| AF-Q8ZK79-F1-model_v4 | 1 | 344 | 13 | 308 | 0.7584 |
0.8507 |
| AF-P29370-F1-model_v4 | 1 | 344 | 1 | 280 | 0.7569 |
0.8633 |
| AF-Q9HWB3-F1-model_v4 | 3 | 344 | 1 | 287 | 0.7559 |
0.856 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 344 | 371 | 668 | 0.5229 |
0.7981 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 344 | 446 | 770 | 0.5135 |
0.7582 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 344 | 93 | 396 | 0.4819 |
0.7963 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 344 | 371 | 668 | 0.5229 |
0.7981 |
| A0A3P6AF83 | GH28 | 1 | 344 | 446 | 770 | 0.5135 |
0.7582 |
| Q5B3N6 | GT25 | 1 | 344 | 512 | 802 | 0.485 |
0.7941 |
| A0A4D6KI88 | GH1 | 1 | 344 | 93 | 396 | 0.4819 |
0.7963 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5y79-assembly1.cif.gz_B | 1 | 344 | 4 | 305 | 0.7124 |
0.7879 |
| 7paf-assembly1.cif.gz_D | 1 | 339 | 1 | 278 | 0.7025 |
0.7993 |
| 6ukj-assembly1.cif.gz_A | 1 | 344 | 9 | 342 | 0.6736 |
0.7243 |
| 6oh3-assembly1.cif.gz_A | 2 | 344 | 1 | 304 | 0.6579 |
0.7246 |
| 5oge-assembly3.cif.gz_H-2 | 3 | 344 | 5 | 294 | 0.6544 |
0.7474 |
| 5oge-assembly2.cif.gz_B | 3 | 344 | 5 | 294 | 0.6538 |
0.7468 |
| 5i20-assembly3.cif.gz_C | 1 | 344 | 1 | 281 | 0.6531 |
0.7451 |
| 5ogk-assembly1.cif.gz_A | 4 | 344 | 3 | 287 | 0.6501 |
0.7462 |
| 5oge-assembly1.cif.gz_E | 1 | 344 | 3 | 299 | 0.6494 |
0.733 |
| 5oge-assembly4.cif.gz_F | 1 | 344 | 3 | 300 | 0.6481 |
0.7297 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92F91-F1-model_v4 | 3 | 344 | 1 | 286 | 0.7689 |
0.8583 |
| AF-Q8YAF3-F1-model_v4 | 3 | 344 | 1 | 286 | 0.7687 |
0.8581 |
| AF-P31125-F1-model_v4 | 1 | 344 | 1 | 292 | 0.7678 |
0.8604 |
| AF-P38943-F1-model_v4 | 1 | 344 | 1 | 297 | 0.7654 |
0.8592 |
| AF-Q56072-F1-model_v4 | 1 | 344 | 1 | 293 | 0.7619 |
0.8516 |
| AF-Q92F94-F1-model_v4 | 3 | 343 | 1 | 285 | 0.7614 |
0.8521 |
| AF-Q8YAF7-F1-model_v4 | 3 | 343 | 1 | 285 | 0.7609 |
0.8516 |
| AF-O33787-F1-model_v4 | 1 | 344 | 4 | 295 | 0.759 |
0.8517 |
| AF-P29370-F1-model_v4 | 1 | 344 | 1 | 280 | 0.7569 |
0.8633 |
| AF-P42394-F1-model_v4 | 1 | 344 | 2 | 292 | 0.7545 |
0.8497 |