PROTEIN: HRGMv2_3551_6_38
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Protein File & Metadata
Source:
HRGMv2_3551_6_38.pdb
Genome ID:
Protein ID:
HRGMv2_3551_6_38
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Protein Sequence
MSDNPIRVLQ IIRSMNQGGA ENFIMNVYRN INKNKIQFDF LVYKEGFFDE EIKKMGGKIF 60 YGKYITEIGQ RRYCKELLEF YKEHPEYQIV HSHLDQVSGI ILEVAKKARS KG 112
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A345PLA4-F1-model_v4 | GT4 | 2 | 110 | 1 | 109 | 0.6067 |
0.9715 |
| AF-A0A385NSQ4-F1-model_v4 | GT4 | 1 | 110 | 1 | 109 | 0.6006 |
0.9583 |
| AF-A0A0B5ARL4-F1-model_v4 | GT4 | 1 | 110 | 1 | 108 | 0.5999 |
0.9685 |
| AF-A0A345XBN3-F1-model_v4 | GT4 | 2 | 110 | 1 | 109 | 0.5995 |
0.9595 |
| AF-A0A160MG42-F1-model_v4 | GT4 | 1 | 110 | 1 | 109 | 0.599 |
0.9589 |
| AF-A0A1W6ABR4-F1-model_v4 | GT4 | 2 | 110 | 1 | 109 | 0.599 |
0.9587 |
| AF-A0A1Y1CTN5-F1-model_v4 | GT4 | 3 | 110 | 1 | 109 | 0.599 |
0.9684 |
| AF-A9VPZ9-F1-model_v4 | GT4 | 2 | 110 | 1 | 109 | 0.5983 |
0.9578 |
| AF-I0JJK9-F1-model_v4 | GT4 | 1 | 110 | 1 | 109 | 0.5981 |
0.9601 |
| AF-A0A5Q2TIJ8-F1-model_v4 | GT4 | 2 | 110 | 1 | 109 | 0.5978 |
0.9586 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Y1CTN5 | GT4 | 3 | 110 | 1 | 109 | 0.599 |
0.9684 |
| WHX41416.1 | GT4 | 1 | 110 | 1 | 109 | 0.5957 |
0.9624 |
| A0A9Q4B0S9 | GT4 | 2 | 110 | 1 | 109 | 0.5922 |
0.9558 |
| WEG11520.1 | GT4 | 1 | 110 | 1 | 110 | 0.5894 |
0.946 |
| A0A0P0D2J8 | GT4 | 1 | 110 | 1 | 112 | 0.588 |
0.9408 |
| P71055 | GT4 | 2 | 110 | 2 | 112 | 0.5815 |
0.9409 |
| UOQ48471.1 | GT4 | 3 | 110 | 3 | 110 | 0.5765 |
0.9365 |
| VEF49072.1 | GT4 | 1 | 110 | 2 | 113 | 0.5756 |
0.9318 |
| A0A410MJP2 | GT4 | 1 | 110 | 1 | 107 | 0.565 |
0.9204 |
| WEM64131.1 | GT4 | 1 | 110 | 332 | 445 | 0.558 |
0.9424 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71055-F1-model_v4 | 2 | 110 | 2 | 112 | 0.5827 |
0.9427 |