PROTEIN: HRGMv2_3544_11_5
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Protein File & Metadata
Source:
HRGMv2_3544_11_5.pdb
Genome ID:
Protein ID:
HRGMv2_3544_11_5
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Protein Sequence
MKKIIFGITS LTLGGAEKVL VDLANKLSEN YDITILTIYA KGEFEKKLNS NVKLKTIFDF 60 QFNELSNIKK KITALKILFF KKYYYKKYIK GDYDIEIAFL EGPITRLFSV KNKDTRKIAW 120 IHNDISKVYG KGFKAKLKMA IDKKIYEKYR TLIFVSKDNR DKFVEKYKDI RDRNLQPLQK 180 RVIYNYIDPN KVLKESEEGV EDIFDNQLFD SSKISRTKSY 220
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3H044-F1-model_v4 | 2 | 220 | 1 | 213 | 0.655 |
0.8528 |
| AF-Q0P9C7-F1-model_v4 | 1 | 220 | 1 | 209 | 0.6538 |
0.8682 |
| AF-Q8DPD8-F1-model_v4 | 1 | 220 | 22 | 300 | 0.6378 |
0.8239 |
| AF-Q2G290-F1-model_v4 | 2 | 220 | 1 | 336 | 0.5932 |
0.771 |
| AF-A0A0K0IYY1-F1-model_v4 | 2 | 220 | 1 | 216 | 0.5698 |
0.7677 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1B2EBD4-F1-model_v4 | GT4 | 1 | 220 | 5 | 212 | 0.7176 |
0.8702 |
| AF-A0A7S9WSE1-F1-model_v4 | GT4 | 1 | 220 | 4 | 331 | 0.6702 |
0.851 |
| AF-A0A1S6U7H4-F1-model_v4 | GT4 | 1 | 220 | 1 | 214 | 0.6675 |
0.8723 |
| AF-A0A1S6TPM8-F1-model_v4 | GT4 | 1 | 220 | 1 | 214 | 0.6666 |
0.8709 |
| AF-A0A6G5QG87-F1-model_v4 | GT4 | 1 | 220 | 1 | 214 | 0.6665 |
0.8689 |
| BCN21513.1 | GT4 | 1 | 220 | 3 | 230 | 0.6651 |
0.8543 |
| AF-A0A6G5R0A0-F1-model_v4 | GT4 | 1 | 220 | 1 | 214 | 0.6651 |
0.8674 |
| AF-A0A7S9NFV6-F1-model_v4 | GT4 | 1 | 220 | 1 | 214 | 0.6639 |
0.8699 |
| A0A9D2VV20 | GT4 | 1 | 220 | 1 | 215 | 0.6638 |
0.862 |
| QKE74326.1 | GT4 | 1 | 220 | 1 | 211 | 0.6633 |
0.8751 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UGA39382.1 | GT4 | 2 | 220 | 1 | 209 | 0.7796 |
0.8377 |
| A0A1B2EBD4 | GT4 | 1 | 220 | 5 | 212 | 0.7176 |
0.8702 |
| QWI52122.1 | GT4 | 1 | 220 | 3 | 218 | 0.6732 |
0.8765 |
| UUF11103.1 | GT4 | 1 | 220 | 1 | 218 | 0.673 |
0.8647 |
| A0A7Y3SXQ2 | GT4 | 1 | 220 | 1 | 217 | 0.6726 |
0.8701 |
| UAM96619.1 | GT4 | 1 | 220 | 2 | 220 | 0.6715 |
0.8604 |
| A0A7S9WSE1 | GT4 | 1 | 220 | 4 | 331 | 0.6702 |
0.851 |
| A0A3S9VSI2 | GT4 | 1 | 220 | 1 | 343 | 0.6696 |
0.8661 |
| BCN21513.1 | GT4 | 1 | 220 | 3 | 230 | 0.6651 |
0.8543 |
| A0A9D2VV20 | GT4 | 1 | 220 | 1 | 215 | 0.6638 |
0.862 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0P9C7-F1-model_v4 | 1 | 220 | 1 | 209 | 0.6538 |
0.8682 |