PROTEIN: HRGMv2_3543_2_30
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Protein File & Metadata
Source:
HRGMv2_3543_2_30.pdb
Genome ID:
Protein ID:
HRGMv2_3543_2_30
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Protein Sequence
MTVLTAIMAF IYLCANIKKI KDKEIIKKLV INIMLIMLIS AFFWIPLLET YNFAEYEAYQ 60 EGAMSTKESF INSGLELKQL FTTSKDSTYV YEIGPHIIIM LILSIFAIKN VVKKEYKKEY 120 ILFLILGILS IFMSTKYFPW QIFNEKVSII QFTWRMLVFS DFFFAIICAI NMENMIKRIK 180 IADVIVISTI AILYGITLNR FIPVNDEILK INEWDIGSIT ENKNEVIAAM GRGEYLPVNS 240 NKNREYILER ENTIEILKGS ANIQNLEKNG QKLKAKVKII EDNAILELPY IYYPGYKIEL 300 NDKKINSFES ENGFLAISIN KTNEEIIEVN YKETILMKVS KRMSIIGIIL FMAYINIEEI 360 KKLYIKLKSK R 371
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CFT8-F1-model_v4 | 1 | 367 | 190 | 539 | 0.5709 |
0.7269 |
| AF-A0A5P3FT45-F1-model_v4 | 1 | 368 | 188 | 540 | 0.5449 |
0.6868 |
| AF-A0A133CH37-F1-model_v4 | 1 | 361 | 94 | 448 | 0.5431 |
0.6486 |
| AF-A0A133CH43-F1-model_v4 | 1 | 361 | 190 | 544 | 0.5258 |
0.6625 |
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 367 | 200 | 566 | 0.4822 |
0.5994 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 1 | 370 | 196 | 601 | 0.4874 |
0.6678 |
| AF-A0A223QHK9-F1-model_v4 | GT2 | 1 | 370 | 571 | 1045 | 0.4071 |
0.6188 |
| AF-A0A1H1SV19-F1-model_v4 | GT2 | 1 | 371 | 574 | 1038 | 0.4007 |
0.6034 |
| AF-A0A346XTY3-F1-model_v4 | GT2 | 1 | 368 | 538 | 998 | 0.4005 |
0.5978 |
| AF-A0A223SBL3-F1-model_v4 | GT2 | 1 | 371 | 573 | 1034 | 0.3989 |
0.5982 |
| AF-A0A0U3NRI0-F1-model_v4 | GT2 | 1 | 371 | 604 | 1051 | 0.3976 |
0.6102 |
| AF-A0A0H4C177-F1-model_v4 | GT2 | 1 | 371 | 603 | 1050 | 0.3956 |
0.6066 |
| AF-A0A7M2TFM2-F1-model_v4 | GT2 | 1 | 371 | 629 | 1073 | 0.3953 |
0.6115 |
| AF-A0A3G5T0Z4-F1-model_v4 | GT2 | 1 | 371 | 639 | 1103 | 0.3952 |
0.6128 |
| AF-A0A5P2UM41-F1-model_v4 | GT2 | 1 | 371 | 623 | 1068 | 0.3947 |
0.6103 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 1 | 370 | 196 | 601 | 0.4874 |
0.6678 |
| A0A1H1SV19 | GT2 | 1 | 371 | 574 | 1038 | 0.4007 |
0.6034 |
| A0A346XTY3 | GT2 | 1 | 368 | 538 | 998 | 0.4005 |
0.5978 |
| A0A8I0GD51 | GT2 | 1 | 368 | 628 | 1088 | 0.3944 |
0.594 |
| A4FNK7 | GT2 | 1 | 371 | 692 | 1131 | 0.3921 |
0.5936 |
| C7QCG9 | GT2 | 1 | 368 | 626 | 1085 | 0.384 |
0.6052 |
| A0A1H2LYE6 | GT2 | 1 | 368 | 622 | 1087 | 0.3817 |
0.6106 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 364 | 208 | 610 | 0.5462 |
0.7017 |