PROTEIN: HRGMv2_3535_7_11
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Protein File & Metadata
Source:
HRGMv2_3535_7_11.pdb
Genome ID:
Protein ID:
HRGMv2_3535_7_11
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Protein Sequence
MKLNIKTIIL FFIIINLIIC EILMDKTNII YFRYIDEFLA CAFLIYNAFY ILKHKKIRML 60 EFKVLVSCVS IFILGILSNI LYLIQADLYT IVLDIISCFK IPIILIGFYN ILDKNTAENL 120 VRLLVIPAKM FILTGFICSI ISLFINIGMR GQYRFGIWGF NFIFKYAFSY ALVLIFNLIV 180 IVISKDKKIN IYKFFTSIQL FLSLKGPAMI TAILIFIIPA LIKNKNKISK KHLLLVLLLS 240 LVLGNYQIKT YLTNENAPRY LLFKYSFITA NEYFPLGSGF ATFGSDMAAK EYSELYYKYG 300 FNALNGMSKE DTKFLNDNYW PMVIGQFGYI GCFFVLFILY NLFKYIQNLK IDYEIKAIFI 360 SSYVYMLISS IGNSIYTISG TAIMMIGIII AFKIDDKDKE V 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A212QE91-F1-model_v4 | GT2 | 2 | 401 | 1 | 574 | 0.5624 |
0.7142 |
| AF-M1FGR5-F1-model_v4 | GT2 | 2 | 401 | 2 | 575 | 0.56 |
0.7128 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 2 | 401 | 1 | 574 | 0.5599 |
0.7105 |
| AF-E4PMS8-F1-model_v4 | GT2 | 2 | 401 | 1 | 574 | 0.5568 |
0.7067 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 4 | 401 | 1 | 569 | 0.5526 |
0.7023 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 2 | 401 | 1 | 573 | 0.5524 |
0.7005 |
| QSP96058.1 | GT2 | 2 | 401 | 7 | 581 | 0.5494 |
0.6989 |
| A0A9Q9IL13 | GT4 | 3 | 401 | 19 | 499 | 0.5492 |
0.7767 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 2 | 401 | 4 | 576 | 0.5474 |
0.6947 |
| WBY01952.1 | GT9 | 1 | 401 | 8 | 533 | 0.5336 |
0.7068 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 2 | 401 | 7 | 581 | 0.5494 |
0.6989 |
| A0A9Q9IL13 | GT4 | 3 | 401 | 19 | 499 | 0.5492 |
0.7767 |
| WBY01952.1 | GT9 | 1 | 401 | 8 | 533 | 0.5336 |
0.7068 |
| UII34295.1 | GT4 | 2 | 401 | 14 | 529 | 0.5103 |
0.6816 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 2 | 400 | 1 | 375 | 0.6657 |
0.7199 |