PROTEIN: HRGMv2_3458_27_5
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Protein File & Metadata
Source:
HRGMv2_3458_27_5.pdb
Genome ID:
Protein ID:
HRGMv2_3458_27_5
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Protein Sequence
MLHTRSNYLF YVITFFLFVL TTSCFSYIYW NPTLGGQILR CFDLIFIFLY FRNKRKIVNA 60 NFEREVNWIF KLAFLSVIGN TFLYHQSPMQ NVINTCSHAF ILYYFLLHFY GIKEKIIIAI 120 LTILVLIILF IQLVQQFTFP IAPFGINIQA ETTNNLIEIR NGLFRFRIET ACFAMLLVFF 180 CWGQLLKKIR LWAIILFVLS LTSIYLFLTR QIIITVLFSI FLSAFLVKNR RLKIWTMCLL 240 AVLCVIFYNW GDLFFEELIE SSRDETDNDN VRIHSAFFFI DKILANPISF FLGNGSPKEA 300 VNWGLKEGFW ISDVGFIGEC FIYGFFYIAV YPIILWKVYK YRNCVPLYIK MYIISTFLIS 360 VMIFPYRTRV EFMIWSMVLY ICDLHINNSK LKYQ 394
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3H4H7-F1-model_v4 | 1 | 392 | 5 | 389 | 0.7066 |
0.7443 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 4 | 391 | 4 | 408 | 0.6785 |
0.7293 |
| QSP96058.1 | GT2 | 1 | 394 | 4 | 517 | 0.5827 |
0.7438 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 1 | 394 | 3 | 576 | 0.5808 |
0.7393 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 394 | 1 | 507 | 0.5773 |
0.735 |
| UII34295.1 | GT4 | 1 | 394 | 7 | 421 | 0.5759 |
0.7715 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 394 | 20 | 419 | 0.5699 |
0.7609 |
| AF-D9S8K7-F1-model_v4 | GT4 | 1 | 393 | 11 | 787 | 0.5519 |
0.7435 |
| AF-A0A410K3K6-F1-model_v4 | GT2 | 2 | 394 | 1 | 510 | 0.5478 |
0.7682 |
| AF-B5L412-F1-model_v4 | GT2 | 1 | 394 | 3 | 483 | 0.5359 |
0.6857 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 4 | 391 | 4 | 408 | 0.6785 |
0.7293 |
| QSP96058.1 | GT2 | 1 | 394 | 4 | 517 | 0.5827 |
0.7438 |
| UII34295.1 | GT4 | 1 | 394 | 7 | 421 | 0.5759 |
0.7715 |
| D5MJ04 | GT9 | 1 | 394 | 20 | 419 | 0.5699 |
0.7609 |
| WBY01952.1 | GT9 | 1 | 394 | 10 | 414 | 0.5576 |
0.7437 |
| D9S8K7 | GT4 | 1 | 393 | 11 | 787 | 0.5519 |
0.7435 |
| B5L412 | GT2 | 1 | 394 | 3 | 483 | 0.5359 |
0.6857 |
| A0A5B7R2V6 | GH5_39 | 1 | 389 | 380 | 790 | 0.4879 |
0.6691 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 1 | 388 | 2 | 403 | 0.656 |
0.6974 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.