PROTEIN: HRGMv2_3406_5_24
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Protein File & Metadata
Source:
HRGMv2_3406_5_24.pdb
Genome ID:
Protein ID:
HRGMv2_3406_5_24
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Protein Sequence
MSNMKKNFAW NMIGSLVNSV TSLFFMIIVT RINGVDEAGI FTFAFSLACL FQVISNYSGR 60 TFQVTNTDDC ITDSDFIYHR YLTSIMMVLC LLVYLLFKDY SKVKVLAIFL LVIFRLVESV 120 GECFYGIIQK NGELYKVGIS LFLKGIIGIL IFSIIDVITK SFLFSIIGLI LVNLFILIIY 180 DDKNYHNFYK RQRVNKENVK IIFKSGFSVF GFTFLNQYLL NAPKYAIDDF LNSSSQTIYG 240 IISMPAMVLI LCSQFIVQPL LPKVTDIVVK NKYAALKKLT FNIIFGVVLV GILGEIFCYL 300 VGISFLQLIY GISLKKYLLH LMIIILGATI YGIIFVISSV LIALRKNSSQ LLFYGISSLF 360 VTIISKILVQ RFAIMGACLS YFITMTFLCL MYIIYFLYVI HVLEKNKKGK DL 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71399-F1-model_v4 | 1 | 403 | 1 | 401 | 0.8606 |
0.8897 |
| AF-P37746-F1-model_v4 | 1 | 405 | 3 | 415 | 0.8558 |
0.8916 |
| AF-P26400-F1-model_v4 | 1 | 404 | 7 | 430 | 0.84 |
0.8924 |
| AF-Q2G1J8-F1-model_v4 | 1 | 410 | 1 | 401 | 0.8363 |
0.8692 |
| AF-P0AAA7-F1-model_v4 | 1 | 404 | 1 | 416 | 0.8302 |
0.8707 |
| AF-Q32EG2-F1-model_v4 | 5 | 397 | 3 | 396 | 0.8258 |
0.868 |
| AF-K0EXA3-F1-model_v4 | 1 | 412 | 30 | 447 | 0.823 |
0.8812 |
| AF-A0A0H3GLL0-F1-model_v4 | 1 | 405 | 1 | 416 | 0.8217 |
0.8611 |
| AF-Q9L6Q9-F1-model_v4 | 1 | 405 | 1 | 416 | 0.8216 |
0.8611 |
| AF-Q2G262-F1-model_v4 | 1 | 401 | 3 | 405 | 0.821 |
0.9144 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 403 | 4 | 437 | 0.7881 |
0.9054 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 402 | 38 | 467 | 0.7452 |
0.8797 |
| QNU38870.1 | GT4 | 1 | 402 | 1 | 408 | 0.7189 |
0.884 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 1 | 412 | 1 | 437 | 0.7061 |
0.9028 |
| B1FZW0 | GT2 | 1 | 412 | 1 | 561 | 0.705 |
0.9014 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 1 | 412 | 215 | 688 | 0.6863 |
0.8693 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 1 | 410 | 221 | 691 | 0.677 |
0.8655 |
| A0A836MCF6 | GT100 | 1 | 412 | 1 | 483 | 0.6762 |
0.8631 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 1 | 407 | 216 | 683 | 0.675 |
0.867 |
| AF-A0A1M4DY09-F1-model_v4 | GT0 | 1 | 412 | 364 | 780 | 0.6608 |
0.8716 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 403 | 4 | 437 | 0.7881 |
0.9054 |
| A0A160T2N7 | GT28 | 1 | 402 | 38 | 467 | 0.7452 |
0.8797 |
| QNU38870.1 | GT4 | 1 | 402 | 1 | 408 | 0.7189 |
0.884 |
| B1FZW0 | GT2 | 1 | 412 | 1 | 561 | 0.705 |
0.9014 |
| A0A836MCF6 | GT100 | 1 | 412 | 1 | 483 | 0.6762 |
0.8631 |
| A0A7G6YY69 | GT4 | 1 | 412 | 31 | 444 | 0.6595 |
0.8827 |
| A0A0J6W0G8 | GH16_3 | 1 | 412 | 17 | 433 | 0.6593 |
0.8397 |
| A0A2U8PPB3 | GT4 | 1 | 401 | 1 | 404 | 0.6566 |
0.9076 |
| A0A975FPH4 | GT4 | 4 | 412 | 1 | 558 | 0.6558 |
0.8685 |
| QJC17489.1 | GT2 | 1 | 404 | 341 | 772 | 0.6546 |
0.9028 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 8 | 409 | 10 | 440 | 0.824 |
0.8878 |
| 7waw-assembly1.cif.gz_A | 9 | 403 | 1 | 428 | 0.7564 |
0.8742 |
| 5y50-assembly1.cif.gz_A | 4 | 403 | 9 | 438 | 0.7237 |
0.7984 |
| 6gwh-assembly1.cif.gz_A | 1 | 410 | 2 | 440 | 0.7144 |
0.7683 |
| 4mlb-assembly1.cif.gz_C | 1 | 410 | 3 | 452 | 0.7123 |
0.7743 |
| 6hfb-assembly3.cif.gz_C | 1 | 410 | 3 | 451 | 0.7104 |
0.7717 |
| 3wbn-assembly1.cif.gz_A | 1 | 407 | 1 | 450 | 0.7061 |
0.7717 |
| 5xjj-assembly1.cif.gz_A | 5 | 404 | 12 | 438 | 0.7038 |
0.7788 |
| 3vvn-assembly1.cif.gz_A | 1 | 407 | 2 | 445 | 0.7016 |
0.7639 |
| 3w4t-assembly1.cif.gz_A | 1 | 407 | 2 | 446 | 0.7007 |
0.7639 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39855-F1-model_v4 | 4 | 401 | 1 | 396 | 0.8964 |
0.9283 |
| AF-Q05347-F1-model_v4 | 1 | 411 | 2 | 437 | 0.8629 |
0.9071 |
| AF-P71399-F1-model_v4 | 1 | 403 | 1 | 401 | 0.8606 |
0.8897 |
| AF-Q45411-F1-model_v4 | 1 | 410 | 9 | 434 | 0.8562 |
0.901 |
| AF-P37746-F1-model_v4 | 1 | 405 | 3 | 415 | 0.8558 |
0.8916 |
| AF-Q99191-F1-model_v4 | 1 | 404 | 8 | 432 | 0.8483 |
0.902 |
| AF-P26400-F1-model_v4 | 1 | 404 | 7 | 430 | 0.84 |
0.8924 |
| AF-P37781-F1-model_v4 | 1 | 405 | 1 | 418 | 0.8345 |
0.8749 |
| AF-P0AAA7-F1-model_v4 | 1 | 404 | 1 | 416 | 0.8302 |
0.8707 |
| AF-Q9CNC5-F1-model_v4 | 1 | 402 | 1 | 399 | 0.8255 |
0.8602 |