PROTEIN: HRGMv2_3229_1_100
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Protein File & Metadata
Source:
HRGMv2_3229_1_100.pdb
Genome ID:
Protein ID:
HRGMv2_3229_1_100
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Protein Sequence
MSLNITKKQV LIDGILNIIA AALPVVVLQL IIFPIVAQKE TETIYGLMIT IYAVFMLIPN 60 ICGNSICNVR LVKNSLYERE QLEGDFNVIV VKYGIINLVI GIIILAYYYR MKDPVGMCLS 120 LIVILLTFLN AYYEVYFSIK LAFKNRLYLR VALVAGYFAG MLLYFLLHRW EVVFLCGQIC 180 TSCFILIKSN LYKEQFVKTS LFKGTDKDCL FLIIAGLLAS SLDYTDRLIL MPIAGAKIVT 240 IYYIAAVIGK LIVFIIPPIK TLLLSYISHI EQLSRKQMIF IIGGGVILCI AMYLICIWIS 300 PYVLMILYPQ YLQRALTLVP IVTIAALISG FSSVVQVFVM RYCKMKWQLI INGFSVGAFF 360 VSSLILLHLY GIIGFCVGNV IGYLVKLCGM VIVLLLGYNK TKGMKVQ 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J8-F1-model_v4 | 5 | 402 | 1 | 397 | 0.8997 |
0.929 |
| AF-P37746-F1-model_v4 | 3 | 403 | 1 | 415 | 0.844 |
0.8832 |
| AF-P71399-F1-model_v4 | 8 | 402 | 1 | 401 | 0.844 |
0.8816 |
| AF-Q32EG2-F1-model_v4 | 7 | 395 | 1 | 396 | 0.8295 |
0.8747 |
| AF-Q57484-F1-model_v4 | 6 | 404 | 1 | 403 | 0.8264 |
0.8602 |
| AF-P0AAA7-F1-model_v4 | 5 | 401 | 1 | 416 | 0.8211 |
0.8703 |
| AF-G3XD19-F1-model_v4 | 5 | 402 | 1 | 410 | 0.8182 |
0.8608 |
| AF-Q58770-F1-model_v4 | 3 | 402 | 1 | 415 | 0.8162 |
0.8593 |
| AF-P26400-F1-model_v4 | 5 | 401 | 6 | 430 | 0.8162 |
0.878 |
| AF-P9WKX9-F1-model_v4 | 1 | 399 | 20 | 431 | 0.8157 |
0.8735 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QNU38870.1 | GT4 | 9 | 400 | 1 | 408 | 0.7026 |
0.8788 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 4 | 405 | 1 | 590 | 0.685 |
0.8903 |
| B1FZW0 | GT2 | 4 | 406 | 1 | 649 | 0.683 |
0.8857 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 5 | 407 | 216 | 688 | 0.6739 |
0.8674 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 3 | 403 | 269 | 683 | 0.6723 |
0.8667 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 5 | 407 | 220 | 693 | 0.672 |
0.8671 |
| A0A836MCF6 | GT100 | 6 | 404 | 1 | 479 | 0.6668 |
0.8703 |
| A0A0J6W0G8 | GH16_3 | 1 | 403 | 15 | 428 | 0.654 |
0.8441 |
| A0A975FPH4 | GT4 | 9 | 406 | 1 | 400 | 0.6463 |
0.8717 |
| AF-A0A7G6YY69-F1-model_v4 | GT4 | 1 | 403 | 20 | 438 | 0.6382 |
0.8656 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QNU38870.1 | GT4 | 9 | 400 | 1 | 408 | 0.7026 |
0.8788 |
| B1FZW0 | GT2 | 4 | 406 | 1 | 649 | 0.683 |
0.8857 |
| A0A836MCF6 | GT100 | 6 | 404 | 1 | 479 | 0.6668 |
0.8703 |
| A0A0J6W0G8 | GH16_3 | 1 | 403 | 15 | 428 | 0.654 |
0.8441 |
| A0A975FPH4 | GT4 | 9 | 406 | 1 | 400 | 0.6463 |
0.8717 |
| A0A1V0ABA3 | GT4 | 6 | 402 | 68 | 790 | 0.6383 |
0.8697 |
| A0A7G6YY69 | GT4 | 1 | 403 | 20 | 438 | 0.6382 |
0.8656 |
| A0A543Z557 | GH16_5 | 1 | 401 | 8 | 436 | 0.6369 |
0.8401 |
| F9ZKY1 | GT2 | 1 | 407 | 14 | 841 | 0.6356 |
0.8661 |
| A0A3T0K5S7 | GT2 | 2 | 400 | 1 | 405 | 0.6297 |
0.8678 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 11 | 403 | 8 | 439 | 0.7743 |
0.8509 |
| 6nc6-assembly2.cif.gz_B | 11 | 396 | 1 | 405 | 0.7581 |
0.8629 |
| 5y50-assembly1.cif.gz_A | 6 | 407 | 5 | 443 | 0.7171 |
0.7832 |
| 6gwh-assembly1.cif.gz_A | 1 | 406 | 1 | 440 | 0.7007 |
0.7572 |
| 6hfb-assembly3.cif.gz_C | 1 | 405 | 2 | 451 | 0.6963 |
0.7614 |
| 3vvs-assembly1.cif.gz_A | 1 | 405 | 1 | 444 | 0.6919 |
0.753 |
| 3vvn-assembly1.cif.gz_A | 1 | 405 | 1 | 445 | 0.6905 |
0.7524 |
| 5xjj-assembly1.cif.gz_A | 8 | 407 | 9 | 447 | 0.6898 |
0.7582 |
| 3vvr-assembly1.cif.gz_A | 1 | 405 | 1 | 440 | 0.6868 |
0.7456 |
| 6ids-assembly1.cif.gz_A | 6 | 407 | 6 | 438 | 0.6857 |
0.7481 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37781-F1-model_v4 | 6 | 402 | 1 | 418 | 0.846 |
0.8956 |
| AF-Q45411-F1-model_v4 | 3 | 407 | 8 | 435 | 0.8448 |
0.8951 |
| AF-P37746-F1-model_v4 | 3 | 403 | 1 | 415 | 0.844 |
0.8832 |
| AF-P71399-F1-model_v4 | 8 | 402 | 1 | 401 | 0.844 |
0.8816 |
| AF-P39855-F1-model_v4 | 9 | 399 | 1 | 396 | 0.8359 |
0.8768 |
| AF-Q03583-F1-model_v4 | 7 | 395 | 1 | 396 | 0.8289 |
0.8741 |
| AF-Q9CNC5-F1-model_v4 | 6 | 400 | 1 | 399 | 0.8287 |
0.8653 |
| AF-Q57484-F1-model_v4 | 6 | 404 | 1 | 403 | 0.8264 |
0.8602 |
| AF-Q05347-F1-model_v4 | 4 | 404 | 1 | 433 | 0.8222 |
0.8815 |
| AF-P0AAA7-F1-model_v4 | 5 | 401 | 1 | 416 | 0.8211 |
0.8703 |