PROTEIN: HRGMv2_3210_12_3
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Protein File & Metadata
Source:
HRGMv2_3210_12_3.pdb
Genome ID:
Protein ID:
HRGMv2_3210_12_3
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Protein Sequence
MKKSLHTILS LLMISVIILI TASCNNDTKT ESDSPANINI DKFSSDEVLC INSSELNVQN 60 DTDSFKAFLN KGGILLVYND AASSNSLGKN FNMQVQAGWS ETDIAAIYYF YGNNLSGTYI 120 INAQNNISSS EQERLIKKAL DEVGAIQSTG KYYLADISDI ALGNLIISSA RYPEGTLTAK 180 YEFFTAQNHF EKDYYTVKTT VTGNPGSVLA SSNSDYESKY RGVSQNTTIK AISSSVLLDA 240 YGPQTTDDNE NYHVSIFDTL YETDKEVLKA EFNYSKPLPN ATIEANCTRN EAIWNVSLEK 300 EARNDTYVFV PAVTFSCPES KSSVDINLSS SYTVDSWNTL KKTISSNRDV TLNPAKQ 357
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55GQ3-F1-model_v4 | 33 | 357 | 52 | 520 | 0.6233 |
0.8161 |
| AF-Q2FXB0-F1-model_v4 | 60 | 357 | 14 | 299 | 0.5119 |
0.5997 |
| AF-Q2FWN9-F1-model_v4 | 39 | 357 | 5 | 333 | 0.4996 |
0.5647 |
| AF-Q2FVK3-F1-model_v4 | 145 | 357 | 25 | 300 | 0.4972 |
0.7591 |
| AF-Q2FVK2-F1-model_v4 | 141 | 357 | 23 | 308 | 0.4966 |
0.7537 |
| AF-Q5VQI5-F1-model_v4 | 36 | 357 | 75 | 501 | 0.4178 |
0.5437 |
| AF-A0A1P8BBZ0-F1-model_v4 | 30 | 356 | 37 | 503 | 0.4161 |
0.5331 |
| AF-Q9ZUK9-F1-model_v4 | 37 | 357 | 87 | 525 | 0.4128 |
0.5485 |
| AF-K7LLI0-F1-model_v4 | 37 | 357 | 96 | 521 | 0.4014 |
0.5317 |
| AF-A0A1D6K625-F1-model_v4 | 38 | 357 | 102 | 585 | 0.3971 |
0.5499 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974ZN30 | CBM13 | 40 | 357 | 87 | 569 | 0.5519 |
0.8189 |
| A0A9E8B9Y7 | CBM13 | 36 | 357 | 38 | 453 | 0.5301 |
0.7484 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1t5r-assembly1.cif.gz_A | 113 | 357 | 1 | 258 | 0.5255 |
0.6595 |
| 1t5r-assembly1.cif.gz_D | 113 | 357 | 1 | 260 | 0.5202 |
0.6565 |
| 2qk7-assembly1.cif.gz_B | 108 | 357 | 1 | 274 | 0.5202 |
0.6663 |
| 1t5r-assembly1.cif.gz_C | 154 | 357 | 1 | 262 | 0.5187 |
0.7741 |
| 1t5r-assembly1.cif.gz_G | 113 | 357 | 1 | 262 | 0.5182 |
0.6548 |
| 1t5r-assembly1.cif.gz_F | 113 | 357 | 1 | 262 | 0.5178 |
0.6547 |
| 1t5r-assembly1.cif.gz_E | 113 | 357 | 1 | 264 | 0.516 |
0.6549 |
| 1t5r-assembly1.cif.gz_B | 113 | 357 | 1 | 264 | 0.5159 |
0.6546 |
| 3lkf-assembly1.cif.gz_A | 106 | 356 | 1 | 278 | 0.5157 |
0.6645 |
| 2lkf-assembly1.cif.gz_A | 106 | 357 | 1 | 283 | 0.5151 |
0.665 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q08677-F1-model_v4 | 38 | 357 | 1 | 445 | 0.5535 |
0.7639 |
| AF-P55870-F1-model_v4 | 34 | 357 | 39 | 488 | 0.5506 |
0.7705 |
| AF-P0A073-F1-model_v4 | 46 | 357 | 11 | 300 | 0.5232 |
0.6085 |
| AF-Q2FXB0-F1-model_v4 | 60 | 357 | 14 | 299 | 0.5119 |
0.5997 |
| AF-P0A074-F1-model_v4 | 60 | 357 | 1 | 300 | 0.5094 |
0.5787 |
| AF-Q6G6Q2-F1-model_v4 | 44 | 357 | 5 | 300 | 0.5032 |
0.5741 |
| AF-Q6GE14-F1-model_v4 | 67 | 357 | 4 | 300 | 0.5028 |
0.5829 |
| AF-Q6G6Q1-F1-model_v4 | 137 | 357 | 21 | 308 | 0.501 |
0.7469 |
| AF-Q6GE13-F1-model_v4 | 138 | 357 | 21 | 308 | 0.5006 |
0.7509 |
| AF-Q2FWN9-F1-model_v4 | 39 | 357 | 5 | 333 | 0.4996 |
0.5647 |