PROTEIN: HRGMv2_3196_11_47
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Protein File & Metadata
Source:
HRGMv2_3196_11_47.pdb
Genome ID:
Protein ID:
HRGMv2_3196_11_47
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Protein Sequence
MNRKVLFIGN SHSYFNDMPE VFARLCEKGA GVNVDAVMLT HPGMTLGWHM EQYYEVRYNL 60 LYGHYDDCVI QQGAHPFPGY EATKEALDQL LPLCRAGGAR PVLAMTWAEK RAPEHQAAMT 120 DAFLRLGKEK NVLVSPIGMA WESMRKTHPD CELFYTDGEH ASPLGDYLVA CTHYETILGQ 180 SCLSLPAEGI DYRQGSEKEL IDPSKVACTF PEEEARWVRE AVHEAVNRIK LIV 233
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HZY8-F1-model_v4 | 1 | 180 | 19 | 200 | 0.6615 |
0.8095 |
| AF-A0A0R4J519-F1-model_v4 | 2 | 180 | 3 | 215 | 0.6306 |
0.8443 |
| AF-I1J7F7-F1-model_v4 | 2 | 185 | 6 | 218 | 0.6246 |
0.8197 |
| AF-A0A0R0KMM3-F1-model_v4 | 2 | 220 | 6 | 264 | 0.6244 |
0.7291 |
| AF-I1N2X7-F1-model_v4 | 2 | 223 | 6 | 256 | 0.623 |
0.7006 |
| AF-E7DDW2-F1-model_v4 | 1 | 223 | 4 | 258 | 0.623 |
0.7007 |
| AF-I1KKF0-F1-model_v4 | 2 | 223 | 6 | 255 | 0.6208 |
0.6973 |
| AF-K0F6E7-F1-model_v4 | 1 | 184 | 77 | 282 | 0.5939 |
0.8429 |
| AF-A0A1D6EEP7-F1-model_v4 | 1 | 180 | 50 | 274 | 0.5793 |
0.8455 |
| AF-Q7AQI8-F1-model_v4 | 1 | 205 | 38 | 296 | 0.5605 |
0.7273 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518I2Y4-F1-model_v4 | CE12 | 1 | 186 | 22 | 231 | 0.64 |
0.8249 |
| AF-A0A514BPE8-F1-model_v4 | CE12 | 1 | 219 | 29 | 279 | 0.5997 |
0.71 |
| AF-A0A1D8YA57-F1-model_v4 | CE12 | 1 | 185 | 37 | 287 | 0.5941 |
0.8281 |
| A5ZAL3 | CBM32 | 1 | 233 | 38 | 275 | 0.5941 |
0.8826 |
| UPK25706.1 | CE12 | 1 | 219 | 41 | 289 | 0.5908 |
0.7103 |
| AF-U5W4W1-F1-model_v4 | CBM32 | 1 | 228 | 299 | 524 | 0.5874 |
0.8448 |
| AF-A0A7U3VSR1-F1-model_v4 | CBM32 | 1 | 228 | 308 | 533 | 0.5866 |
0.8481 |
| AF-A0A3G9E0F7-F1-model_v4 | CE0 | 1 | 231 | 23 | 273 | 0.5625 |
0.8367 |
| A0A7K3NPM6 | CBM50 | 1 | 221 | 65 | 292 | 0.5605 |
0.7263 |
| AF-A0A3A9H442-F1-model_v4 | CE15 | 1 | 231 | 27 | 277 | 0.5507 |
0.837 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A5ZAL3 | CBM32 | 1 | 233 | 38 | 275 | 0.5941 |
0.8826 |
| UPK25706.1 | CE12 | 1 | 219 | 41 | 289 | 0.5908 |
0.7103 |
| A0A7U3VSR1 | CBM32 | 1 | 228 | 308 | 533 | 0.5866 |
0.8481 |
| A0A7K3NPM6 | CBM50 | 1 | 221 | 65 | 292 | 0.5605 |
0.7263 |
| A0A7D7G580 | CE15 | 1 | 231 | 37 | 287 | 0.549 |
0.8372 |
| A0A2K9P5H0 | CE12 | 1 | 186 | 121 | 362 | 0.5397 |
0.8197 |
| A0A4P6HRM4 | CBM50 | 1 | 221 | 91 | 320 | 0.5343 |
0.7166 |
| UIE37272.1 | CBM9 | 2 | 233 | 1 | 266 | 0.4983 |
0.8388 |
| R9QZW5 | CE15 , GH78 | 1 | 231 | 33 | 282 | 0.4815 |
0.8391 |
| UJX42658.1 | CBM50 | 1 | 213 | 37 | 680 | 0.4711 |
0.7769 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4i8i-assembly1.cif.gz_A | 1 | 231 | 1 | 251 | 0.7652 |
0.8296 |
| 4s1p-assembly1.cif.gz_A | 1 | 178 | 1 | 184 | 0.7542 |
0.8852 |
| 4rw0-assembly2.cif.gz_B | 2 | 180 | 1 | 183 | 0.7024 |
0.8254 |
| 4jgg-assembly2.cif.gz_B | 3 | 180 | 1 | 179 | 0.696 |
0.8169 |
| 7e16-assembly2.cif.gz_B | 1 | 179 | 2 | 206 | 0.6674 |
0.8315 |
| 3hp4-assembly1.cif.gz_A | 2 | 230 | 1 | 182 | 0.6598 |
0.7673 |
| 8gr2-assembly1.cif.gz_A | 1 | 179 | 11 | 211 | 0.6465 |
0.8139 |
| 7tlv-assembly1.cif.gz_A | 1 | 179 | 11 | 210 | 0.6433 |
0.8231 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HZY8-F1-model_v4 | 1 | 180 | 19 | 200 | 0.6615 |
0.8095 |
| AF-Q07792-F1-model_v4 | 1 | 180 | 18 | 199 | 0.6577 |
0.8026 |