PROTEIN: HRGMv2_3195_8_58
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Protein File & Metadata
Source:
HRGMv2_3195_8_58.pdb
Genome ID:
Protein ID:
HRGMv2_3195_8_58
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Protein Sequence
MRENIIKQKK YKRSGIPLFW KILALNLLFA LFLIAIAEPY YETDDDFSPI ALPGRFYGTS 60 SGDLFFSNIV LGQILKLLTG LCPVLSWHWV LMFAASVLSY SVIGVVLIKK MGYKYGLFFF 120 SVFLIVTCYQ FYVLLNFTRV AALATAGGWC GALYSMEYGT WKKGLFPSGL LLIYGAVLRF 180 NPWLMASAVA FAYFCVATLV QLHPFSAGSI SEFLRRKIKH IAALTGIVLV VGALAVISQM 240 YYNATPEWQD YNEYNHARSL LLDYGIPDYA TNQEGYEALG ISQDDLSMLQ SWSFGDPEVF 300 SLDHMQQMAG MREKSPWTFT ELGKNLLDSC RYLLQAPLFL MGLFFIIVTM LLSKRKYPVS 360 QGVLLLATIL LMIYLVHGGR VLPRVTVGLT MAFSLFVLCC VNGEELPQEV VCGKRGRILV 420 VTALGSCLLL NGTLLLGEGT YGRHSAPTEE LQAERQEILD TLDQSNLYLM DTFSRIYYFR 480 LFPFWAGTNG FSQTNVYLLG SSFTMHPLYN QILRDYGVEN PFKALYEKDN VFLIDTTNYE 540 TKRSYIQRHY ADTVTFSVVD SVDKRYIFAA SAIQGTVTAE PKQDLHTKIE FMDLTDDQNA 600 GDEFYWLSGS LGSTGTEETA QLCYYLEMQR DGETRYFRFV PQEDTGDFVL GIPKEELTPG 660 EYALRVITKQ KDQTNYVWSS EAGELSFP 688
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 4 | 673 | 4 | 516 | 0.6085 |
0.7116 |
| AF-Q8CZ87-F1-model_v4 | 1 | 571 | 22 | 518 | 0.5837 |
0.7036 |
| AF-E7F5M2-F1-model_v4 | 7 | 685 | 1 | 681 | 0.5773 |
0.6047 |
| AF-A0A0R4IE52-F1-model_v4 | 3 | 571 | 1 | 493 | 0.572 |
0.6833 |
| AF-K0EN63-F1-model_v4 | 20 | 620 | 1 | 507 | 0.5684 |
0.6868 |
| AF-A0A1C1CER1-F1-model_v4 | 4 | 597 | 9 | 547 | 0.5523 |
0.654 |
| AF-I1MM02-F1-model_v4 | 1 | 582 | 6 | 759 | 0.4912 |
0.6139 |
| AF-B2RYD7-F1-model_v4 | 5 | 582 | 30 | 785 | 0.4734 |
0.6085 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 10 | 571 | 1 | 477 | 0.6177 |
0.7412 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 11 | 573 | 1 | 473 | 0.6106 |
0.7352 |
| AF-A0A517YV87-F1-model_v4 | GT83 | 11 | 571 | 3 | 485 | 0.6089 |
0.7301 |
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 3 | 574 | 11 | 504 | 0.6086 |
0.7273 |
| AF-A0A7T5CJ27-F1-model_v4 | GT83 | 11 | 571 | 3 | 483 | 0.607 |
0.7291 |
| A0A2T0SDP3 | GT83 | 2 | 572 | 16 | 494 | 0.6062 |
0.7368 |
| AF-Q1MJ97-F1-model_v4 | GT83 | 11 | 570 | 1 | 490 | 0.6053 |
0.7217 |
| AF-E4NCG6-F1-model_v4 | GT83 | 11 | 570 | 1 | 470 | 0.604 |
0.7294 |
| AF-A0A1B1C4Y6-F1-model_v4 | GT83 | 6 | 570 | 1 | 491 | 0.6034 |
0.7185 |
| AF-A0A192T5U8-F1-model_v4 | GT83 | 6 | 570 | 1 | 491 | 0.6027 |
0.7201 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A518B1Q4 | GT83 | 5 | 578 | 1 | 492 | 0.6113 |
0.7295 |
| I0H3R1 | GT83 | 5 | 572 | 1 | 482 | 0.6094 |
0.7319 |
| A0A517YV87 | GT83 | 11 | 571 | 3 | 485 | 0.6089 |
0.7301 |
| A0A6C2YNQ2 | GT83 | 3 | 574 | 11 | 504 | 0.6086 |
0.7273 |
| A0A2T0SDP3 | GT83 | 2 | 572 | 16 | 494 | 0.6062 |
0.7368 |
| A0A5S9F4H0 | GT83 | 14 | 572 | 1 | 478 | 0.6025 |
0.7271 |
| A0A0U3EJ09 | GT83 | 18 | 573 | 2 | 497 | 0.6025 |
0.7143 |
| A0A2U8FMR6 | GT83 | 7 | 571 | 7 | 479 | 0.6018 |
0.7352 |
| A0A8D5JSU7 | GT83 | 6 | 571 | 1 | 488 | 0.5999 |
0.7158 |
| A0A120F7X7 | GT83 | 4 | 574 | 22 | 511 | 0.5993 |
0.7259 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 11 | 570 | 1 | 490 | 0.6058 |
0.7223 |
| AF-Q1MLH5-F1-model_v4 | 11 | 572 | 2 | 468 | 0.5955 |
0.7248 |
| AF-Q1MJ96-F1-model_v4 | 17 | 571 | 7 | 494 | 0.5919 |
0.7119 |
| AF-Q1MJ94-F1-model_v4 | 17 | 571 | 7 | 492 | 0.5911 |
0.7115 |