PROTEIN: HRGMv2_3195_17_43
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_3195_17_43.pdb
Genome ID:
Protein ID:
HRGMv2_3195_17_43
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRTKRTLINL VYTLGQSLVL LLLGLVTRKL FVTNFDAFVP GYSDTINNLF NFFSIAEFGV 60 GSVISYRLYE QIAAKDIDRI SRYMSLYKWA YRAVGAFIAL MAVVCAFFLP LLVVQEQEPD 120 WLMVYGIYAM TALSTLSSYF LITRRLMYTC TQQGYVCTKI DLGFNVATSL AKIAIALWIP 180 NYFLYFGIQI LFNTLANVVV AWRYKKDFPE LYEAKVSLAD FKELGIFHDL RYYLVHKLSN 240 TIYGSSDNIV ITSMRGAALV TRTGNYSTIS TSVNNICNKI LDSFAAAIGS IVYDRDAEAD 300 GHAQSVFWGL DLFSYCFGSF VAVAYFCLFQ PFIRLWMGES FLLPMAYVFW FCMNEYIGWN 360 HRMLGSYRAV LGHFEEDQWF MVASAVSNVV LSFALVIPFG LAGVVAATVI AHCFMWIGRG 420 RVVCRHYMKG CGWRYLGLQL VHIVTLFAVM FFTSWLCDLC GAGILAFAGK VCIVAVVPNL 480 CNLLLYGWTS DAAYLRGRGM DLVRKLSARL RKEENP 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 507 | 1 | 476 | 0.843 |
0.8921 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8369 |
0.8662 |
| AF-Q8DPI1-F1-model_v4 | 1 | 514 | 3 | 495 | 0.83 |
0.8678 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 508 | 2 | 478 | 0.8298 |
0.8795 |
| AF-H9L497-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8281 |
0.8752 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8205 |
0.8682 |
| AF-Q9I1M8-F1-model_v4 | 2 | 498 | 1 | 469 | 0.7985 |
0.8553 |
| AF-P37746-F1-model_v4 | 1 | 491 | 3 | 415 | 0.7982 |
0.901 |
| AF-Q32ET1-F1-model_v4 | 1 | 501 | 1 | 511 | 0.7977 |
0.8375 |
| AF-P0AF16-F1-model_v4 | 1 | 501 | 1 | 511 | 0.7955 |
0.8355 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 508 | 2 | 512 | 0.821 |
0.8525 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 506 | 41 | 545 | 0.7752 |
0.8308 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.7336 |
0.8066 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.7092 |
0.9004 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 516 | 11 | 688 | 0.6683 |
0.8749 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 513 | 3 | 589 | 0.6649 |
0.8564 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 516 | 4 | 553 | 0.6574 |
0.8242 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 2 | 516 | 1 | 665 | 0.6552 |
0.8183 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 516 | 8 | 674 | 0.6541 |
0.8292 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 501 | 21 | 515 | 0.6404 |
0.8353 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 508 | 2 | 512 | 0.821 |
0.8525 |
| A0A160T2N7 | GT28 | 1 | 506 | 41 | 545 | 0.7752 |
0.8308 |
| QNU38870.1 | GT4 | 1 | 516 | 1 | 515 | 0.7336 |
0.8066 |
| QJC17489.1 | GT2 | 1 | 516 | 342 | 849 | 0.7092 |
0.9004 |
| D1BIF1 | GT4 | 1 | 516 | 11 | 688 | 0.6683 |
0.8749 |
| A0A3Q9G719 | GT4 | 1 | 513 | 3 | 589 | 0.6649 |
0.8564 |
| A0A3T0RPT8 | GT4 | 1 | 516 | 4 | 553 | 0.6574 |
0.8242 |
| A0A2U8PPB3 | GT4 | 2 | 516 | 1 | 665 | 0.6552 |
0.8183 |
| A0A517Z2I8 | GT2 | 1 | 516 | 8 | 674 | 0.6541 |
0.8292 |
| F9ZKY1 | GT2 | 1 | 501 | 21 | 515 | 0.6404 |
0.8353 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 8 | 499 | 1 | 496 | 0.7956 |
0.8369 |
| 6nc6-assembly2.cif.gz_B | 6 | 500 | 1 | 461 | 0.7723 |
0.8346 |
| 7wag-assembly1.cif.gz_A | 2 | 502 | 2 | 513 | 0.7707 |
0.8177 |
| 6cc4-assembly1.cif.gz_A | 1 | 506 | 56 | 608 | 0.7423 |
0.832 |
| 6fhz-assembly1.cif.gz_A | 6 | 432 | 8 | 437 | 0.7278 |
0.824 |
| 5y50-assembly1.cif.gz_A | 2 | 428 | 6 | 436 | 0.6729 |
0.7719 |
| 4mlb-assembly1.cif.gz_C | 1 | 429 | 4 | 448 | 0.6602 |
0.7591 |
| 3wbn-assembly1.cif.gz_A | 1 | 429 | 3 | 446 | 0.6502 |
0.7467 |
| 6ids-assembly1.cif.gz_A | 1 | 429 | 6 | 432 | 0.6477 |
0.7386 |
| 3vvs-assembly1.cif.gz_A | 1 | 429 | 4 | 440 | 0.6434 |
0.7353 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 4 | 515 | 1 | 505 | 0.8822 |
0.9067 |
| AF-Q58467-F1-model_v4 | 1 | 505 | 1 | 507 | 0.8369 |
0.8662 |
| AF-Q48457-F1-model_v4 | 1 | 509 | 2 | 485 | 0.8279 |
0.8741 |
| AF-P33699-F1-model_v4 | 1 | 512 | 5 | 490 | 0.8272 |
0.8765 |
| AF-P77377-F1-model_v4 | 1 | 510 | 1 | 486 | 0.8205 |
0.8682 |
| AF-D4GU68-F1-model_v4 | 1 | 509 | 2 | 472 | 0.8071 |
0.863 |
| AF-O32273-F1-model_v4 | 1 | 513 | 6 | 483 | 0.8036 |
0.8574 |
| AF-O67658-F1-model_v4 | 1 | 515 | 3 | 499 | 0.802 |
0.8391 |
| AF-O34674-F1-model_v4 | 1 | 507 | 1 | 539 | 0.7999 |
0.8517 |
| AF-O34238-F1-model_v4 | 1 | 501 | 9 | 525 | 0.7983 |
0.847 |