PROTEIN: HRGMv2_3195_12_13
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Protein File & Metadata
Source:
HRGMv2_3195_12_13.pdb
Genome ID:
Protein ID:
HRGMv2_3195_12_13
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Protein Sequence
MRILFVLDSV EAPAAANPRL GRRLAEALSA GGQEVEILEL WDGTHAPPAV SGCVTHSLPF 60 ADEAAMNRVL ENGAAGGTPV PLRLLRLAAH PAAVGAAVRQ FALHAPRRVT AARKAMETLH 120 RQRPYDAVCA VAAPYRAAFA LEGAALPGAR KLLWQMDPYA ANESYHAPGG YDREQALLQA 180 LDHTFITAQA APDYAPGGPL EPCAGRVSEL GFPSLVPVER EDPDPTLCAF CGTLYPGLRT 240 PDALLNLFPQ LDDRLTLVMA GGGWEAFGPQ RAGAEAALGD RLQILGPVPH EQAAALERRA 300 GVLISIGNTA SNQLPSKLFE MFAAGKPVLH LAAGPKDAAL PYLARWPLAF VWKNESDTPA 360 LRRWLAENAG RTLPFEKAAD CFPEYTPGCV ARQFLQQAAP AAKGESL 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05083-F1-model_v4 | 1 | 398 | 1 | 353 | 0.7626 |
0.8361 |
| AF-Q5FAD9-F1-model_v4 | 1 | 400 | 1 | 354 | 0.7598 |
0.8313 |
| AF-G3XD85-F1-model_v4 | 1 | 405 | 2 | 373 | 0.7591 |
0.8126 |
| AF-Q2G1J7-F1-model_v4 | 1 | 399 | 4 | 401 | 0.7578 |
0.7888 |
| AF-Q5F734-F1-model_v4 | 1 | 398 | 4 | 354 | 0.7566 |
0.8334 |
| AF-Q59002-F1-model_v4 | 1 | 404 | 1 | 387 | 0.7547 |
0.7954 |
| AF-O07147-F1-model_v4 | 1 | 404 | 1 | 367 | 0.7535 |
0.8186 |
| AF-K0EV99-F1-model_v4 | 5 | 403 | 1 | 356 | 0.7527 |
0.8216 |
| AF-K0ETY5-F1-model_v4 | 1 | 406 | 2 | 383 | 0.7519 |
0.7977 |
| AF-A0A0H3GSJ8-F1-model_v4 | 1 | 405 | 4 | 354 | 0.7516 |
0.8278 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1W1Z2J3 | GT0 | 1 | 404 | 2 | 388 | 0.8067 |
0.8427 |
| A0A517ZPG7 | GT4 | 1 | 405 | 1 | 438 | 0.8043 |
0.8595 |
| AF-A0A517ZPG7-F1-model_v4 | GT4 | 1 | 405 | 1 | 438 | 0.8043 |
0.8595 |
| UVR78230.1 | GT0 | 1 | 400 | 1 | 412 | 0.7967 |
0.8314 |
| AF-A0A4D6GU89-F1-model_v4 | GT4 | 1 | 403 | 10 | 388 | 0.7944 |
0.8477 |
| A0A0W0VWK4 | GT4 | 1 | 399 | 1 | 431 | 0.7933 |
0.847 |
| AF-A0A0E3UVM0-F1-model_v4 | GT4 | 1 | 403 | 1 | 390 | 0.793 |
0.8275 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 400 | 7 | 424 | 0.7927 |
0.8391 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 400 | 7 | 424 | 0.7909 |
0.8378 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 400 | 7 | 424 | 0.789 |
0.8359 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPG7 | GT4 | 1 | 405 | 1 | 438 | 0.8043 |
0.8595 |
| A0A4D6GU89 | GT4 | 1 | 403 | 10 | 388 | 0.7944 |
0.8477 |
| A0A223D1F8 | GT4 | 1 | 405 | 3 | 409 | 0.7942 |
0.8186 |
| A0A0W0VWK4 | GT4 | 1 | 399 | 1 | 431 | 0.7933 |
0.847 |
| A0A0E3UVM0 | GT4 | 1 | 403 | 1 | 390 | 0.793 |
0.8275 |
| T1SF07 | GT4 | 1 | 400 | 7 | 424 | 0.7927 |
0.8391 |
| A0A0E3UNS9 | GT4 | 1 | 404 | 1 | 426 | 0.7887 |
0.8328 |
| A0A0U4V950 | GT4 | 1 | 406 | 4 | 405 | 0.7873 |
0.8153 |
| A0A371KN06 | GT4 | 1 | 403 | 2 | 399 | 0.7872 |
0.8152 |
| A0A1Y0EIW0 | GT4 | 1 | 407 | 1 | 437 | 0.7867 |
0.8309 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly3.cif.gz_F | 1 | 405 | 2 | 369 | 0.775 |
0.8315 |
| 3mbo-assembly2.cif.gz_C | 1 | 404 | 2 | 373 | 0.7731 |
0.8262 |
| 3mbo-assembly1.cif.gz_A | 1 | 404 | 3 | 372 | 0.773 |
0.8289 |
| 3mbo-assembly4.cif.gz_G | 1 | 405 | 2 | 365 | 0.7712 |
0.8313 |
| 3mbo-assembly3.cif.gz_E | 1 | 404 | 1 | 375 | 0.7707 |
0.8205 |
| 6n1x-assembly1.cif.gz_A | 1 | 404 | 4 | 377 | 0.7665 |
0.8205 |
| 5d00-assembly1.cif.gz_B | 1 | 402 | 3 | 361 | 0.7603 |
0.8275 |
| 7qsg-assembly1.cif.gz_A | 1 | 404 | 4 | 379 | 0.7563 |
0.8106 |
| 7fg9-assembly1.cif.gz_B-2 | 1 | 404 | 2 | 341 | 0.7419 |
0.8278 |
| 2gek-assembly1.cif.gz_A | 1 | 404 | 1 | 354 | 0.7404 |
0.8175 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GU66-F1-model_v4 | 7 | 402 | 1 | 372 | 0.769 |
0.8218 |
| AF-P42982-F1-model_v4 | 1 | 404 | 3 | 377 | 0.7656 |
0.8179 |
| AF-Q81ST7-F1-model_v4 | 1 | 407 | 2 | 381 | 0.765 |
0.8114 |
| AF-O05083-F1-model_v4 | 1 | 398 | 1 | 353 | 0.7626 |
0.8361 |
| AF-Q46634-F1-model_v4 | 1 | 399 | 2 | 351 | 0.7578 |
0.8337 |
| AF-Q59002-F1-model_v4 | 1 | 404 | 1 | 387 | 0.7547 |
0.7954 |
| AF-Q93P60-F1-model_v4 | 1 | 407 | 1 | 397 | 0.7503 |
0.7802 |
| AF-Q9R9N0-F1-model_v4 | 1 | 404 | 1 | 343 | 0.7489 |
0.8296 |
| AF-Q8KIU8-F1-model_v4 | 1 | 404 | 2 | 400 | 0.7472 |
0.7791 |
| AF-Q58577-F1-model_v4 | 1 | 403 | 3 | 351 | 0.7455 |
0.8255 |