PROTEIN: HRGMv2_3190_5_42
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Protein File & Metadata
Source:
HRGMv2_3190_5_42.pdb
Genome ID:
Protein ID:
HRGMv2_3190_5_42
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Protein Sequence
MFLRVKRKIV LYVTLSSFLC MLLISLTCFF AFRQIIFDRF SSCAVQCVEQ NASNASGYFK 60 MAAESCRQVS ENEEAALAVA ERSPEKLNKL LAGLERAIPG AIGASLYGAD GAESYTGSRG 120 VPAFLPFSSV EELPGFSEFM SSPQKKTTVF ARTGSIPESY YTISSYDPAN GLITLASKLV 180 NERGSTCGYL LLDIDPSYVY GFFYYDTETF VSDFASFLAS DAGQILPNGL DAEPGYLKQS 240 VAGETARSSD GKNIILCLPL YGEGIWAITL CPLAGYHGDV LKLGLSLAGI TLLLTLLSFF 300 ISLGLGRSIV TPLSSLSERM KSSPRQ 326
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GQ03-F1-model_v4 | 1 | 326 | 5 | 352 | 0.6581 |
0.8136 |
| AF-P76330-F1-model_v4 | 8 | 326 | 20 | 537 | 0.6117 |
0.8002 |
| AF-Q32HJ0-F1-model_v4 | 8 | 326 | 20 | 413 | 0.6076 |
0.7945 |
| AF-Q8ZNT5-F1-model_v4 | 8 | 326 | 20 | 413 | 0.6044 |
0.7937 |
| AF-O24925-F1-model_v4 | 1 | 326 | 3 | 379 | 0.6035 |
0.8207 |
| AF-Q0PBZ3-F1-model_v4 | 1 | 326 | 1 | 363 | 0.6011 |
0.8113 |
| AF-Q0P8B2-F1-model_v4 | 1 | 326 | 3 | 404 | 0.5998 |
0.8251 |
| AF-P76446-F1-model_v4 | 2 | 326 | 2 | 376 | 0.598 |
0.7453 |
| AF-O24911-F1-model_v4 | 1 | 326 | 2 | 376 | 0.5909 |
0.8028 |
| AF-Q0P864-F1-model_v4 | 1 | 326 | 10 | 366 | 0.5886 |
0.796 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQZ87596.1 | GH43 | 1 | 326 | 1 | 338 | 0.6566 |
0.7604 |
| AF-A0A222WLX1-F1-model_v4 | GH43 | 4 | 292 | 18 | 414 | 0.5654 |
0.7209 |
| A0A735B9L0 | GH73 | 7 | 326 | 1 | 359 | 0.5062 |
0.6453 |
| A0A093XUT4 | GH3 | 1 | 325 | 1084 | 1516 | 0.4495 |
0.7975 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UQZ87596.1 | GH43 | 1 | 326 | 1 | 338 | 0.6566 |
0.7604 |
| A0A222WLX1 | GH43 | 4 | 292 | 18 | 414 | 0.5654 |
0.7209 |
| A0A735B9L0 | GH73 | 7 | 326 | 1 | 359 | 0.5062 |
0.6453 |
| A0A093XUT4 | GH3 | 1 | 325 | 1084 | 1516 | 0.4495 |
0.7975 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ltx-assembly2.cif.gz_B | 34 | 280 | 1 | 235 | 0.6757 |
0.8027 |
| 4jgp-assembly1.cif.gz_B | 33 | 283 | 1 | 206 | 0.6677 |
0.8368 |
| 4jgq-assembly1.cif.gz_B | 33 | 278 | 1 | 202 | 0.6668 |
0.841 |
| 5avf-assembly1.cif.gz_A | 29 | 283 | 5 | 244 | 0.6654 |
0.7926 |
| 3lif-assembly2.cif.gz_B | 33 | 278 | 1 | 238 | 0.665 |
0.7919 |
| 6py3-assembly2.cif.gz_B | 26 | 280 | 1 | 238 | 0.6649 |
0.7872 |
| 5lt9-assembly1.cif.gz_A | 35 | 283 | 1 | 234 | 0.6641 |
0.7905 |
| 6py5-assembly1.cif.gz_A | 36 | 275 | 1 | 227 | 0.663 |
0.7982 |
| 6py4-assembly1.cif.gz_A | 33 | 279 | 1 | 232 | 0.6629 |
0.7925 |
| 7k5n-assembly1.cif.gz_A-2 | 29 | 278 | 1 | 237 | 0.6604 |
0.7851 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8XB92-F1-model_v4 | 8 | 326 | 20 | 413 | 0.6178 |
0.8079 |
| AF-Q3Z0N3-F1-model_v4 | 8 | 326 | 25 | 481 | 0.6133 |
0.8047 |
| AF-P76330-F1-model_v4 | 8 | 326 | 20 | 537 | 0.6117 |
0.8002 |
| AF-Q1RAI4-F1-model_v4 | 9 | 326 | 26 | 489 | 0.6113 |
0.8043 |
| AF-Q8FGJ7-F1-model_v4 | 9 | 326 | 26 | 487 | 0.6107 |
0.8034 |
| AF-Q83KM9-F1-model_v4 | 8 | 326 | 25 | 418 | 0.6094 |
0.7996 |
| AF-Q32HJ0-F1-model_v4 | 8 | 326 | 20 | 413 | 0.6076 |
0.7945 |
| AF-Q57N14-F1-model_v4 | 8 | 326 | 20 | 416 | 0.6066 |
0.7964 |
| AF-Q8ZNT5-F1-model_v4 | 8 | 326 | 20 | 413 | 0.6044 |
0.7937 |
| AF-O31671-F1-model_v4 | 1 | 326 | 4 | 351 | 0.6042 |
0.7457 |