PROTEIN: HRGMv2_3189_8_48
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Protein File & Metadata
Source:
HRGMv2_3189_8_48.pdb
Genome ID:
Protein ID:
HRGMv2_3189_8_48
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Protein Sequence
MEDFFRHDNY ARSIYITNKE KVFETSELHQ SDFHSIKFGR EEKCENSILE VKLDFEILDN 60 VSCQSFGYRL GIDCYMEKYP QWDNKYFPTA VRCEKNGFWA VFESPLGKKI AVCSPDNIVS 120 WKNEYMRLNC DVGHRIYTTS IEFFNVNKQP KRHIKSPQML QKGDKYSYRI YYKFTDNIED 180 CISFISKYAD IKITYPTKFL AEKGEEIYFN GKSFSFNDCG RYIISDKPFA ETSIYVRENW 240 MYYLEKGFAK AMKCQQKAGT HAESWYGYFT KAFYAKVIND KQLTEYVTQE FDALFDLLTQ 300 GRRKKKMRRK TLPHRIQNIS SLISLLVDFY ELTQKRKYLD YADDLASLLI KSQAKDGSYR 360 SYKVHYTCVI YPAKSMLELV LAEREAGLTN RAKEHFESAS RAVKNLYELM DNIQTEGQMT 420 FEDGMLSCEC LQLAYYALLI ENKEERQAMT QAAVKIYNKH KCLQQHIVPD CRSYGATLRF 480 WEARYDINFN SNMMNAPHGW TSWKNYASYY LYILTGKIEY LFDLMNTMGS CMQCVDSNGD 540 LNWAFIIDPC IIGNQMMPSD NKYGIRYKEV VIGECYLPMV SDWYRQKQKY LPLQYARSFK 600 RLNYGKEYGG SCDNDVNEHF KCLEETVFGK IFIHECNDHE FVVYNCKVDD CAFFYNDKFV 660 KKAVIYSMKD KDFIINEKVY NVKKGINIID L 691
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 1 | 691 | 39 | 890 | 0.6623 |
0.7561 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-E0S376-F1-model_v4 | PL27 | 1 | 661 | 5 | 593 | 0.7554 |
0.8278 |
| A0A975CYI3 | PL27 | 1 | 627 | 4 | 598 | 0.747 |
0.8144 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 1 | 645 | 1 | 643 | 0.7451 |
0.7832 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 1 | 646 | 1 | 655 | 0.7385 |
0.7797 |
| AF-A0A3Q8VJB7-F1-model_v4 | PL27 | 1 | 690 | 2 | 652 | 0.7381 |
0.7725 |
| AF-A0A0A7I1G9-F1-model_v4 | PL27 | 1 | 646 | 1 | 655 | 0.7369 |
0.7781 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 1 | 689 | 8 | 640 | 0.7369 |
0.7831 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 1 | 664 | 8 | 619 | 0.7341 |
0.7927 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 1 | 645 | 7 | 663 | 0.7308 |
0.7764 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 1 | 657 | 4 | 629 | 0.7286 |
0.7762 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| E0S376 | PL27 | 1 | 661 | 5 | 593 | 0.7554 |
0.8278 |
| A0A975CYI3 | PL27 | 1 | 627 | 4 | 598 | 0.747 |
0.8144 |
| A0A516PYA3 | PL27 | 1 | 689 | 8 | 640 | 0.7369 |
0.7831 |
| F5Y9B7 | PL27 | 1 | 664 | 8 | 619 | 0.7341 |
0.7927 |
| A0A2S0KVT5 | PL27 | 1 | 645 | 7 | 663 | 0.7308 |
0.7764 |
| A0A5P8M7F3 | PL27 | 1 | 657 | 4 | 629 | 0.7286 |
0.7762 |
| A0A6I5ZZU4 | PL27 | 1 | 691 | 41 | 717 | 0.7274 |
0.7653 |
| C7Q3H3 | PL27 | 1 | 646 | 22 | 680 | 0.7209 |
0.7748 |
| E3QS34 | PL27 | 1 | 688 | 12 | 702 | 0.7208 |
0.7404 |
| A0A077EC71 | PL27 | 1 | 662 | 22 | 675 | 0.7193 |
0.761 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 1 | 630 | 4 | 669 | 0.7224 |
0.7882 |
| 5nok-assembly1.cif.gz_A | 1 | 630 | 8 | 668 | 0.7158 |
0.7804 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.