PROTEIN: HRGMv2_3081_6_28
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Protein File & Metadata
Source:
HRGMv2_3081_6_28.pdb
Genome ID:
Protein ID:
HRGMv2_3081_6_28
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Protein Sequence
MSEENLENNS LPGSDVQEIY EVPKPEEPAS APALPKKPSV FLNDWFLMLA LYAVTLTLHI 60 LMTQVTTMFN LTPDEYAVTA VAAWFNGYDW SQTVSAGGYY GYFQSLFYIP VFWFIDDPML 120 QYRVMILING VLMSFAPVIV YYLSRKWFGV RKLSSVFIAI ICGMYPAYML LTKYTWNETL 180 CCLLPWVFAL LMYHSMKNMK DTKAIVKQQI FAVLGGLTLV AAYATHGRMI ALLAAGVVLE 240 LVVLFSMKRR VFALSGFFGS IIVGFLADKA IKGYLQNALW LKEQSDKASV NTIENTLGRI 300 FDSDPEKLMR FPQTLVGHFF YFISSTYGFG AIAMVLIISG IVMYYVTRSR AKKGAGELTA 360 DGKAKTYITG SLAIFCWFAF LVMGAIFVVS VGFKATSTVF DTRADTTIFG RYIETFFPLA 420 VFPALIMIYR NRFSVAHSFA ALISAAGVFF LTEIITVPAV IGDGTTEKGV VSAMILGLAP 480 LKIGEGLKDT ITQTTFLKII TVVLALLLAV VIIRLIMVKK QGGMFNWVAI PLGALLMYTS 540 LYGFDGYTIV QGKNASYGAQ YVSEAMEMID GCEYNDVLAF SMKSERYVKA QFLFPDMNIR 600 LASTLKKLNS LSKRPDFIIA DREDNLQLWA GDLWLVGDIN HNTHLYACTN AARQWCEEKG 660 LTLTPPASFT YSGDNIPATS SVTREDGNAV MPSGSAVYTN NFVLYSSGSF TFTIRGEDMK 720 DLSITLTSDK KANDIPYEIV SSSDDEIVLN YSVTNAKTEN VQLKLTNRSG SPATISEVKM 780 TKDSVIPVVI LPAASAAA 798
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F428-F1-model_v4 | 23 | 790 | 6 | 658 | 0.5986 |
0.6751 |
| AF-Q9HUZ2-F1-model_v4 | 46 | 781 | 8 | 478 | 0.5946 |
0.7604 |
| AF-K0EVV4-F1-model_v4 | 34 | 792 | 20 | 657 | 0.5908 |
0.6787 |
| AF-Q9HY61-F1-model_v4 | 43 | 651 | 2 | 549 | 0.5884 |
0.7063 |
| AF-K0EVQ0-F1-model_v4 | 38 | 653 | 1 | 552 | 0.586 |
0.6996 |
| AF-K0F1P6-F1-model_v4 | 19 | 794 | 1 | 503 | 0.584 |
0.7291 |
| AF-Q8ZP99-F1-model_v4 | 36 | 748 | 4 | 516 | 0.5823 |
0.7176 |
| AF-P76473-F1-model_v4 | 43 | 665 | 1 | 550 | 0.5812 |
0.6954 |
| AF-Q8VDB2-F1-model_v4 | 35 | 670 | 1 | 486 | 0.5808 |
0.7288 |
| AF-Q32DT1-F1-model_v4 | 43 | 665 | 2 | 550 | 0.5805 |
0.6961 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 29 | 789 | 8 | 504 | 0.6467 |
0.8102 |
| AF-A0A0A8DXT4-F1-model_v4 | GT83 | 43 | 654 | 4 | 498 | 0.6199 |
0.7794 |
| AF-A0A0S3U140-F1-model_v4 | GT83 | 26 | 790 | 1 | 567 | 0.6194 |
0.7337 |
| AF-A0A097EMF3-F1-model_v4 | GT83 | 40 | 662 | 1 | 574 | 0.6186 |
0.7283 |
| AF-A0A6M3HUM2-F1-model_v4 | GT83 | 45 | 663 | 7 | 595 | 0.6173 |
0.723 |
| AF-A0A2Z4FP52-F1-model_v4 | GT22 | 34 | 790 | 2 | 501 | 0.6123 |
0.7718 |
| AF-A0A1Z4JDL7-F1-model_v4 | GT83 | 30 | 665 | 12 | 577 | 0.6099 |
0.7298 |
| AF-A5GRP2-F1-model_v4 | GT83 | 37 | 757 | 1 | 569 | 0.6097 |
0.7282 |
| AF-A0A2Z4Y6P6-F1-model_v4 | GT83 | 37 | 648 | 1 | 495 | 0.6092 |
0.7593 |
| AF-A0A1J0KUK4-F1-model_v4 | GT83 | 44 | 663 | 10 | 600 | 0.608 |
0.7133 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6C2YNQ2 | GT83 | 29 | 789 | 8 | 504 | 0.6467 |
0.8102 |
| A0A075WTA5 | GT83 | 43 | 664 | 2 | 459 | 0.624 |
0.8001 |
| G0JQR9 | GT83 | 31 | 665 | 13 | 569 | 0.6217 |
0.749 |
| A0A068NUM4 | GT83 | 50 | 648 | 1 | 475 | 0.6198 |
0.7834 |
| A0A097EMF3 | GT83 | 40 | 662 | 1 | 574 | 0.6186 |
0.7283 |
| D5MI18 | GT83 | 34 | 664 | 10 | 566 | 0.6172 |
0.7418 |
| D5MJ06 | GT83 | 43 | 665 | 7 | 536 | 0.617 |
0.7537 |
| A2BXP5 | GT83 | 30 | 757 | 1 | 597 | 0.6164 |
0.7213 |
| Q1Q622 | GT83 | 37 | 666 | 1 | 536 | 0.6164 |
0.7455 |
| BCT95651.1 | GT83 | 46 | 662 | 1 | 494 | 0.616 |
0.7687 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 43 | 670 | 1 | 541 | 0.5905 |
0.7114 |
| 5ezm-assembly1.cif.gz_A | 42 | 664 | 1 | 537 | 0.5811 |
0.7026 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67270-F1-model_v4 | 44 | 653 | 1 | 499 | 0.6009 |
0.7461 |
| AF-Q4KC80-F1-model_v4 | 43 | 654 | 2 | 549 | 0.5905 |
0.7083 |
| AF-Q4ZSZ0-F1-model_v4 | 38 | 654 | 1 | 550 | 0.5886 |
0.7037 |
| AF-Q9HY61-F1-model_v4 | 43 | 651 | 2 | 549 | 0.5884 |
0.7063 |
| AF-A6V1N8-F1-model_v4 | 43 | 651 | 2 | 549 | 0.5882 |
0.706 |
| AF-B7VBN0-F1-model_v4 | 43 | 651 | 2 | 549 | 0.5879 |
0.7056 |
| AF-Q02R27-F1-model_v4 | 43 | 651 | 2 | 549 | 0.5865 |
0.7035 |
| AF-A4SQX1-F1-model_v4 | 46 | 653 | 3 | 547 | 0.5844 |
0.7029 |
| AF-Q1C744-F1-model_v4 | 44 | 650 | 5 | 554 | 0.5841 |
0.7016 |
| AF-A0KGY4-F1-model_v4 | 44 | 653 | 1 | 547 | 0.5838 |
0.6999 |