PROTEIN: HRGMv2_3039_52_4
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Protein File & Metadata
Source:
HRGMv2_3039_52_4.pdb
Genome ID:
Protein ID:
HRGMv2_3039_52_4
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Protein Sequence
MELMDKLQIL TDSAKYDVAC TSSGVDRGPK PGMIGTAAIA GICHSFSADG RCISLLKVLM 60 SNSCIYDCQY CVNRCSNDVP RASFTPEELA TLTIEFYRRN YIEGLFLSSG VRKNPDYTME 120 QMCRVLELLR GEYRFNGYIH AKAIPGCSPE LVQKLGMLCD RMSVNIEMPS ERSLTQFAPN 180 KSKDAILRPM TRIRDGIRQN KEELAVYRHA PAFVPAGQST QMIIGATPDT DFQILRLSQS 240 LYKKYALKRV FFSAYIPVGT NALLPQNVPP PLLREHRLYQ ADWLMRFYGF RVEELLDEEH 300 PSLDPLLDPK CHWALRHLDQ FPVEVNRADK ETLLRVPGIG VKSAARILSA RRVGTLSFEG 360 LKKLGVVLKR AAYFITCRGQ MMPGVRFTPE AIYRNLVTGN RISPDRMPDS LGRQLSWSDV 420 TGLLPEREVR QQCLTGQM 438
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132P1Z7-F1-model_v4 | 6 | 401 | 5 | 323 | 0.5449 |
0.6472 |
| AF-A0A077ZJJ7-F1-model_v4 | 94 | 436 | 1 | 455 | 0.5367 |
0.9009 |
| AF-Q2FVJ7-F1-model_v4 | 47 | 438 | 43 | 288 | 0.5173 |
0.7881 |
| AF-Q32I44-F1-model_v4 | 47 | 438 | 34 | 283 | 0.5083 |
0.7758 |
| AF-P9WPQ7-F1-model_v4 | 48 | 438 | 68 | 313 | 0.5024 |
0.7816 |
| AF-A0A077ZJ88-F1-model_v4 | 6 | 365 | 10 | 573 | 0.4237 |
0.5967 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6M3K642-F1-model_v4 | GT2 | 5 | 376 | 7 | 471 | 0.3965 |
0.5663 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7o1p-assembly1.cif.gz_A | 47 | 438 | 45 | 286 | 0.5309 |
0.8195 |
| 5ff4-assembly1.cif.gz_A | 47 | 438 | 45 | 286 | 0.5221 |
0.8236 |
| 3ciw-assembly1.cif.gz_A | 46 | 438 | 44 | 286 | 0.5217 |
0.8189 |
| 3iix-assembly1.cif.gz_A | 47 | 438 | 46 | 286 | 0.5217 |
0.8249 |
| 5fep-assembly1.cif.gz_A | 46 | 438 | 43 | 285 | 0.5216 |
0.8175 |
| 7o26-assembly1.cif.gz_A | 47 | 438 | 46 | 287 | 0.5216 |
0.8239 |
| 7o1o-assembly1.cif.gz_A | 47 | 438 | 56 | 297 | 0.5156 |
0.8252 |
| 8qmn-assembly1.cif.gz_A | 46 | 438 | 54 | 297 | 0.5154 |
0.8174 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7VFE6-F1-model_v4 | 49 | 438 | 5 | 248 | 0.5573 |
0.7863 |
| AF-A9FD62-F1-model_v4 | 1 | 429 | 26 | 370 | 0.539 |
0.6359 |
| AF-B7J403-F1-model_v4 | 48 | 438 | 35 | 284 | 0.5336 |
0.7794 |
| AF-Q8CQB3-F1-model_v4 | 47 | 438 | 37 | 282 | 0.5335 |
0.7854 |
| AF-B5ELR8-F1-model_v4 | 48 | 438 | 35 | 284 | 0.5332 |
0.7788 |
| AF-P73191-F1-model_v4 | 49 | 438 | 3 | 253 | 0.5309 |
0.7686 |
| AF-Q4L9U7-F1-model_v4 | 47 | 438 | 45 | 290 | 0.5282 |
0.7881 |
| AF-Q5HKJ7-F1-model_v4 | 47 | 438 | 45 | 290 | 0.5278 |
0.7874 |
| AF-Q11A09-F1-model_v4 | 49 | 438 | 4 | 254 | 0.5251 |
0.7682 |
| AF-B9EA22-F1-model_v4 | 47 | 438 | 42 | 287 | 0.5209 |
0.7877 |