PROTEIN: HRGMv2_3039_41_10
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Protein File & Metadata
Source:
HRGMv2_3039_41_10.pdb
Genome ID:
Protein ID:
HRGMv2_3039_41_10
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Protein Sequence
MKETAGQEQK RYRACLQESP RLFRPAEALD WEADVIGRVS RYVLAPVLGV FAEWVFGQAR 60 RDGRRRLYFL ARDGYLPYQA VRLLCQKRGL SLECRYLCCS RYSLRVPLFH RLPREETLNY 120 VCRSGVDVTL PKILARAGLD RREADAVRES LPLSGSGEER LSYAELGEIR RLLADCPLFW 180 EYTDRHSRLA WPGLAGYLRQ EGLLEEQPDA LVDSGWVGSM QKTLGGALEL LGRTRSLRGY 240 YWGLYELPDG VRRGDYRSCF FTPEGELREK VFFCNSLFEA IFTAPHGMTL SYRQEGGRFV 300 PCYAPMAESR TAFVRRLEGL LLPYIARFAE EQAPDEAQQR AELRTVGKLL ARFMGSPSRE 360 EAEAFGSLPF SDDVLEEAGR QIASPLTETE LTAGHALGRI RAAAGIKKGG VRDSAWYEGS 420 AVRFSSGPRR HLRQYRLYQY LRHLRKIRGN RKKGRE 456
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 10 | 433 | 206 | 631 | 0.6499 |
0.8161 |
| AF-Q0P8I2-F1-model_v4 | 1 | 447 | 69 | 979 | 0.4747 |
0.6725 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 14 | 449 | 638 | 1091 | 0.5805 |
0.8568 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 14 | 448 | 620 | 1067 | 0.5777 |
0.8487 |
| A0A1I7GMF6 | GT2 | 14 | 445 | 636 | 1083 | 0.5758 |
0.8553 |
| A0A974WXG9 | GT4 | 1 | 438 | 190 | 1077 | 0.575 |
0.8469 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 5 | 441 | 5 | 403 | 0.5623 |
0.7637 |
| A0A9J7AXY3 | GT2 | 4 | 454 | 4 | 432 | 0.5544 |
0.7393 |
| V4JBH5 | GT2 | 1 | 451 | 1 | 658 | 0.5453 |
0.704 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 29 | 441 | 7 | 405 | 0.54 |
0.7888 |
| QRK05458.1 | GT4 | 15 | 455 | 249 | 992 | 0.5344 |
0.7987 |
| A6M2M4 | GT2 | 6 | 453 | 211 | 915 | 0.5272 |
0.8057 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 14 | 448 | 620 | 1067 | 0.5777 |
0.8487 |
| A0A1I7GMF6 | GT2 | 14 | 445 | 636 | 1083 | 0.5758 |
0.8553 |
| A0A974WXG9 | GT4 | 1 | 438 | 190 | 1077 | 0.575 |
0.8469 |
| A0A0U5F758 | GT2 | 5 | 441 | 5 | 403 | 0.5623 |
0.7637 |
| A0A9J7AXY3 | GT2 | 4 | 454 | 4 | 432 | 0.5544 |
0.7393 |
| V4JBH5 | GT2 | 1 | 451 | 1 | 658 | 0.5453 |
0.704 |
| A0A0H3KC95 | GT2 | 29 | 441 | 7 | 405 | 0.54 |
0.7888 |
| QRK05458.1 | GT4 | 15 | 455 | 249 | 992 | 0.5344 |
0.7987 |
| A6M2M4 | GT2 | 6 | 453 | 211 | 915 | 0.5272 |
0.8057 |
| W8KPG0 | GT2 | 6 | 445 | 3 | 398 | 0.5264 |
0.7859 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 17 | 368 | 241 | 591 | 0.5722 |
0.8322 |
| 8a0m-assembly1.cif.gz_B | 6 | 437 | 457 | 876 | 0.5422 |
0.7975 |
| 8a0m-assembly2.cif.gz_C | 6 | 437 | 591 | 1024 | 0.5372 |
0.8033 |
| 8a0c-assembly1.cif.gz_A | 6 | 437 | 595 | 1028 | 0.5363 |
0.8031 |
| 8a0m-assembly1.cif.gz_A | 6 | 437 | 590 | 1023 | 0.5361 |
0.8015 |
| 8a0c-assembly1.cif.gz_B | 6 | 437 | 595 | 1025 | 0.5293 |
0.7934 |
| 8a0m-assembly2.cif.gz_D | 6 | 437 | 486 | 887 | 0.5113 |
0.7843 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.