PROTEIN: HRGMv2_3027_28_7
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Protein File & Metadata
Source:
HRGMv2_3027_28_7.pdb
Genome ID:
Protein ID:
HRGMv2_3027_28_7
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Protein Sequence
MQSANKYTAN RENGAVICEN GLPWQPRLFC DERVMAEITD NAVSEIRYFN PNGSGSNIVF 60 RKNFLKATGF YIETEDKNFG LELKNTQMLP LGFEGEWSAD GCNFRFSFYT VNNSIIIILK 120 TPDMLTEKCK YRFEIKKNAF FTPQNLERDF KNPQLSGGER VWGVFRSESG VYKTFFCENG 180 CDTCIAMTSN RRSALRITKR NTKYDFYFEN ISPNTEYVWA VSFAPDEIKA EENCKNAAED 240 YKRIISERLA DYKTAAQKAP AFNTGDKAVD NFMSLAPLYN ESLKVRELSG VLRASTKHYF 300 AWGSDSVTEA DSLAFWGDNE YSGKIIDYAV SADIPVVCAY GNDGKNLHKT DGFKIGANIF 360 FIAYLYCYVS GGGVLKDSAY AFAKKIFENT LKAYDEKSGM FKTGMSAEFD YSSAFAATHS 420 SADAYGFKEN IQTYIAFRSM QVLAYIKGDT ETAERITPIM NKFEENADPL FFDDNEGFYS 480 SAVDSKTGDK ADIYSPYLAR IENEFVSDII YPRCEALTEY FKKNFVSENG IRPINKNDPA 540 YDGDANQMHC WWPVYNADFY IRCIQSADYR ALLEKYVGWV SYWSERLTVP EGIDCYCDNA 600 NPDFDDWNMC CGAWQQYNYR AFYQSVVRGV YGLDFDAFGV TVFPHSYRDV SVKNLFMLNR 660 KFDVEIFGVG RYTKKITVNG TELRSTNRIP FDLLRDKNTV LVEKTQEKPD FPQIVRFNSA 720 KILNFQADAE KIVCDVEIPY HAVLAVAGNV GEILVDGKVT VLRPSGDTKT AVINGSGVKK 780 LEIIRGGFE 789
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175W6Z5-F1-model_v4 | 3 | 707 | 5 | 792 | 0.6918 |
0.7848 |
| AF-Q59005-F1-model_v4 | 1 | 719 | 1 | 615 | 0.6554 |
0.7462 |
| AF-P42592-F1-model_v4 | 9 | 702 | 20 | 783 | 0.6537 |
0.7469 |
| AF-Q9VKD9-F1-model_v4 | 9 | 737 | 19 | 739 | 0.6534 |
0.7049 |
| AF-U7PSZ4-F1-model_v4 | 5 | 704 | 21 | 790 | 0.6507 |
0.742 |
| AF-A0A133CSL2-F1-model_v4 | 5 | 706 | 9 | 699 | 0.6503 |
0.7102 |
| AF-K0EKF5-F1-model_v4 | 2 | 701 | 18 | 649 | 0.6485 |
0.7459 |
| AF-Q8DNW5-F1-model_v4 | 10 | 702 | 4 | 803 | 0.6462 |
0.7484 |
| AF-K0ERA7-F1-model_v4 | 1 | 766 | 4 | 768 | 0.6449 |
0.6773 |
| AF-P9WN13-F1-model_v4 | 1 | 766 | 1 | 768 | 0.6442 |
0.6778 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6I5UA64-F1-model_v4 | GH0 | 4 | 786 | 4 | 716 | 0.7258 |
0.7776 |
| UDY34292.1 | GH0 | 22 | 782 | 15 | 720 | 0.7256 |
0.7859 |
| AF-A0A6C0PAK5-F1-model_v4 | GH0 | 24 | 746 | 1 | 695 | 0.7241 |
0.7827 |
| AF-D9RYP3-F1-model_v4 | GH0 | 25 | 770 | 1 | 687 | 0.7235 |
0.7863 |
| AF-A0A1C4Y147-F1-model_v4 | GH0 | 4 | 786 | 4 | 716 | 0.7235 |
0.7751 |
| AF-A0A1A8ZAT5-F1-model_v4 | GH0 | 4 | 770 | 4 | 715 | 0.7232 |
0.7752 |
| UOQ44828.1 | GH0 | 24 | 748 | 1 | 692 | 0.7231 |
0.7833 |
| AF-F5L3Y8-F1-model_v4 | GH0 | 24 | 715 | 1 | 699 | 0.7228 |
0.7861 |
| AF-A0A3G3K4J0-F1-model_v4 | GH0 | 24 | 747 | 1 | 697 | 0.7227 |
0.7803 |
| AF-A0A1C4YHW5-F1-model_v4 | GH0 | 4 | 786 | 4 | 715 | 0.7225 |
0.7748 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A3Z095 | GH176 | 1 | 715 | 1 | 706 | 0.7278 |
0.7807 |
| A0A1Q2MCY1 | GH94 | 2 | 704 | 3 | 762 | 0.7193 |
0.8028 |
| A0A9E8R2I1 | GH133 | 9 | 768 | 32 | 749 | 0.7172 |
0.7884 |
| A0A2U8W0F4 | GH176 | 3 | 778 | 3 | 719 | 0.7171 |
0.766 |
| A0A516HG17 | GH133 | 9 | 768 | 12 | 723 | 0.7167 |
0.7809 |
| A0A3Q9I8D4 | GH133 | 9 | 767 | 23 | 738 | 0.7156 |
0.7849 |
| QZT36543.1 | GH133 | 9 | 768 | 30 | 752 | 0.714 |
0.7845 |
| A0A7G6YQI8 | GH133 | 9 | 767 | 33 | 747 | 0.7122 |
0.7888 |
| WGJ15727.1 | GH176 | 3 | 781 | 3 | 728 | 0.7115 |
0.759 |
| C7M2T4 | GH176 | 4 | 726 | 4 | 727 | 0.7113 |
0.7608 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8bou-assembly1.cif.gz_A | 1 | 705 | 1 | 807 | 0.7071 |
0.808 |
| 1v7v-assembly1.cif.gz_A | 2 | 704 | 1 | 779 | 0.7042 |
0.795 |
| 8ho9-assembly1.cif.gz_A | 2 | 705 | 1 | 811 | 0.7004 |
0.8038 |
| 3s4c-assembly1.cif.gz_A-2 | 3 | 704 | 1 | 822 | 0.7003 |
0.8098 |
| 8ho8-assembly1.cif.gz_B | 3 | 704 | 1 | 809 | 0.7001 |
0.8047 |
| 3acs-assembly1.cif.gz_B | 2 | 704 | 1 | 822 | 0.6998 |
0.8082 |
| 3afj-assembly1.cif.gz_B | 3 | 704 | 1 | 822 | 0.6995 |
0.809 |
| 2cqt-assembly1.cif.gz_A | 2 | 704 | 1 | 822 | 0.6994 |
0.8079 |
| 3qde-assembly1.cif.gz_B | 2 | 704 | 1 | 811 | 0.6994 |
0.8034 |
| 3s4b-assembly1.cif.gz_A | 3 | 704 | 1 | 822 | 0.6989 |
0.8084 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B9K7M6-F1-model_v4 | 2 | 705 | 1 | 813 | 0.7003 |
0.8042 |
| AF-Q76IQ9-F1-model_v4 | 3 | 704 | 1 | 801 | 0.6979 |
0.7983 |
| AF-Q9F8X1-F1-model_v4 | 2 | 704 | 1 | 800 | 0.6968 |
0.7959 |
| AF-Q7S0S2-F1-model_v4 | 3 | 705 | 5 | 791 | 0.6909 |
0.7854 |
| AF-Q8P3J4-F1-model_v4 | 3 | 706 | 11 | 798 | 0.6899 |
0.7863 |
| AF-Q9HLE2-F1-model_v4 | 35 | 705 | 1 | 581 | 0.6658 |
0.7755 |
| AF-Q54KX5-F1-model_v4 | 5 | 778 | 11 | 713 | 0.6639 |
0.7202 |
| AF-Q32M88-F1-model_v4 | 6 | 767 | 4 | 723 | 0.6595 |
0.7122 |
| AF-Q978S7-F1-model_v4 | 6 | 705 | 10 | 623 | 0.6579 |
0.7554 |
| AF-Q4J7W0-F1-model_v4 | 1 | 635 | 1 | 558 | 0.6563 |
0.7771 |