PROTEIN: HRGMv2_3020_48_7
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Protein File & Metadata
Source:
HRGMv2_3020_48_7.pdb
Genome ID:
Protein ID:
HRGMv2_3020_48_7
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Protein Sequence
MTKLNAKASI INRVISLVCN FASRTVFIKI LGNEYLGLGG MFGNVFSVLS LCELGLGEAV 60 SQSLYKPLAR KEFGIIKSII QYYSKIYRVI SALTFTLSVA FMPFLPYVFP DIRKIEGYRA 120 IYLLFVVHQM LSYYFAPKRS LVMCDQRMYA VMAIRTVTSV LLTAVQIFFL YSTQNYLIYI 180 FFRIFFLSAD GLVVNMYANR SFPYINDKNF AACEIHKDYK KGVWSNTKAL IYHRIGGVIN 240 SSADSILISS CLGFSQMGVY SNYSLIIHSV GGFVSLAVNA ASASVGNLGA TEKAKKSEQV 300 LGKICFANFV MMTNCTALFV NLINPFISWW IGPEKCFGTV ETAVIIACFY MSYIRDPVQI 360 FIHSYAVFKS TGPLYIARGI LNLVLSLFFV KRYGAAGVFA GTLISTVVTA FFFEPVLLFK 420 GAFGTKPGNF MKAYLSYPVV STAVCLLTLT VTSHMFTYTL LDMIIRAAAV LVLTNISLAI 480 MYGKTDEFRT LISFVPFFRK IKRLNMNKSE HLSNLNG 517
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G262-F1-model_v4 | 1 | 503 | 5 | 476 | 0.8369 |
0.893 |
| AF-Q58467-F1-model_v4 | 1 | 503 | 6 | 507 | 0.8291 |
0.8638 |
| AF-H9L497-F1-model_v4 | 1 | 509 | 6 | 492 | 0.8268 |
0.8732 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 504 | 2 | 478 | 0.8265 |
0.8776 |
| AF-Q8DPI1-F1-model_v4 | 1 | 503 | 3 | 491 | 0.8211 |
0.8651 |
| AF-P77377-F1-model_v4 | 1 | 509 | 6 | 492 | 0.8169 |
0.8635 |
| AF-Q2G0R7-F1-model_v4 | 1 | 509 | 6 | 508 | 0.8047 |
0.8392 |
| AF-Q2FXH6-F1-model_v4 | 1 | 506 | 6 | 553 | 0.7951 |
0.8557 |
| AF-Q32ET1-F1-model_v4 | 1 | 495 | 2 | 510 | 0.7889 |
0.8367 |
| AF-A0A1A7RX54-F1-model_v4 | 1 | 504 | 9 | 528 | 0.7876 |
0.8351 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 499 | 4 | 508 | 0.8103 |
0.855 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 500 | 42 | 545 | 0.763 |
0.8262 |
| QNU38870.1 | GT4 | 1 | 510 | 1 | 481 | 0.7287 |
0.8536 |
| QJC17489.1 | GT2 | 1 | 504 | 343 | 845 | 0.6991 |
0.8964 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 1 | 513 | 1 | 828 | 0.6616 |
0.8301 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 1 | 517 | 3 | 905 | 0.6615 |
0.8469 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 517 | 5 | 653 | 0.6593 |
0.8263 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 514 | 11 | 639 | 0.6539 |
0.8594 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 507 | 12 | 671 | 0.65 |
0.838 |
| AF-D7BDH0-F1-model_v4 | GT4 | 1 | 517 | 4 | 766 | 0.6482 |
0.8275 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 499 | 4 | 508 | 0.8103 |
0.855 |
| A0A160T2N7 | GT28 | 1 | 500 | 42 | 545 | 0.763 |
0.8262 |
| QNU38870.1 | GT4 | 1 | 510 | 1 | 481 | 0.7287 |
0.8536 |
| QJC17489.1 | GT2 | 1 | 504 | 343 | 845 | 0.6991 |
0.8964 |
| A0A2U8PPB3 | GT4 | 1 | 513 | 1 | 828 | 0.6616 |
0.8301 |
| A0A3Q9G719 | GT4 | 1 | 517 | 3 | 905 | 0.6615 |
0.8469 |
| A0A3T0RPT8 | GT4 | 1 | 517 | 5 | 653 | 0.6593 |
0.8263 |
| D1BIF1 | GT4 | 1 | 514 | 11 | 639 | 0.6539 |
0.8594 |
| A0A517Z2I8 | GT2 | 1 | 507 | 12 | 671 | 0.65 |
0.838 |
| D7BDH0 | GT4 | 1 | 517 | 4 | 766 | 0.6482 |
0.8275 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 5 | 493 | 1 | 496 | 0.7914 |
0.8373 |
| 6nc6-assembly2.cif.gz_B | 3 | 502 | 1 | 461 | 0.7726 |
0.8339 |
| 7wag-assembly1.cif.gz_A | 1 | 494 | 2 | 509 | 0.7693 |
0.8267 |
| 6cc4-assembly1.cif.gz_A | 1 | 496 | 46 | 608 | 0.7283 |
0.8316 |
| 6fhz-assembly1.cif.gz_A | 3 | 427 | 8 | 437 | 0.7262 |
0.8273 |
| 5y50-assembly1.cif.gz_A | 1 | 424 | 9 | 437 | 0.6715 |
0.7765 |
| 6hfb-assembly3.cif.gz_C | 1 | 425 | 6 | 448 | 0.6655 |
0.7706 |
| 4mlb-assembly1.cif.gz_C | 1 | 425 | 6 | 449 | 0.6651 |
0.7707 |
| 6gwh-assembly1.cif.gz_A | 1 | 425 | 5 | 436 | 0.6564 |
0.7524 |
| 6z70-assembly1.cif.gz_A | 1 | 426 | 4 | 444 | 0.6546 |
0.7515 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 1 | 504 | 2 | 500 | 0.8739 |
0.9089 |
| AF-Q58467-F1-model_v4 | 1 | 503 | 6 | 507 | 0.8291 |
0.8638 |
| AF-Q48457-F1-model_v4 | 1 | 500 | 6 | 483 | 0.8265 |
0.8817 |
| AF-P77377-F1-model_v4 | 1 | 509 | 6 | 492 | 0.8169 |
0.8635 |
| AF-P33699-F1-model_v4 | 1 | 504 | 9 | 487 | 0.8133 |
0.8735 |
| AF-O34674-F1-model_v4 | 1 | 509 | 5 | 544 | 0.8117 |
0.8618 |
| AF-D4GU68-F1-model_v4 | 1 | 503 | 2 | 472 | 0.7974 |
0.8543 |
| AF-O32273-F1-model_v4 | 1 | 503 | 7 | 482 | 0.7915 |
0.8488 |
| AF-O83529-F1-model_v4 | 1 | 504 | 7 | 526 | 0.7854 |
0.8309 |
| AF-B4E9G3-F1-model_v4 | 1 | 494 | 2 | 514 | 0.7854 |
0.839 |