PROTEIN: HRGMv2_3020_28_15
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Protein File & Metadata
Source:
HRGMv2_3020_28_15.pdb
Genome ID:
Protein ID:
HRGMv2_3020_28_15
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Detailed structural information will appear here after analysis...
Protein Sequence
MNTALKSVNK KIIYNYYCTW TSQKTWNCSV NPDAITAQDM RDRLGSEFLF GEKGVLNFHP 60 ECIRQDMLVV LDDGWDVAKG VTHEKDSDNA SFGSLIPDAG KFPEIAGLAP YERLKALSQK 120 VKELGYAGLG LWVPSNYFGE DVSEDYEERL KKAGAFWEER GKMCSYADIK YLKVDWGYHG 180 RDIRYRSLMT EAVKKHSPST LIEHVVGIFD MPYDPQPWKQ ESPEFLSFLD TAKRTFLVSD 240 VYRTYDVVEK LSTATTLMRV SKLFDVGAAA GDGLAGIINV EDDVTVAAAL GMSAGIMRDP 300 CGPYYGDVTK ALVWQRFSPP WRLEAENCFH SDELLCDSYF FDSPEGVWPY VGQKTIKQYA 360 PSCISRGVPL PDVDVSSHVN GKNSENGESA EKPFVLASKN PDTLAYTVAS LPRTAENKYK 420 YRVPAKVTVK EAELTAPIGI FGTFEKLDIQ FTENLNNIRV FARDMLSEEC FSEITNEVSC 480 TQNTLTIDGK LLEKTAAKRD GGDLSENAVI IKLERI 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9FXT4-F1-model_v4 | 9 | 515 | 60 | 417 | 0.5647 |
0.7287 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U3RG35-F1-model_v4 | GH27 | 10 | 516 | 12 | 443 | 0.6077 |
0.687 |
| AF-B8H885-F1-model_v4 | GH27 | 10 | 514 | 4 | 427 | 0.6036 |
0.6805 |
| AF-D5UJJ0-F1-model_v4 | GH27 | 10 | 515 | 4 | 440 | 0.6028 |
0.6717 |
| AF-A0A1G5E1I1-F1-model_v4 | GH27 | 10 | 513 | 6 | 436 | 0.6023 |
0.6748 |
| AF-F8A360-F1-model_v4 | GH27 | 10 | 516 | 4 | 443 | 0.6018 |
0.6744 |
| AF-A0A3Q9C7X0-F1-model_v4 | GH27 | 15 | 514 | 1 | 412 | 0.5982 |
0.6802 |
| AF-A0A291GTT8-F1-model_v4 | GH27 | 10 | 513 | 6 | 437 | 0.5902 |
0.662 |
| AF-C5BUU5-F1-model_v4 | GH27 | 15 | 516 | 1 | 424 | 0.5897 |
0.6631 |
| AF-W0EZ95-F1-model_v4 | GH27 | 9 | 513 | 26 | 444 | 0.5855 |
0.6786 |
| AF-A0A7L5DKC3-F1-model_v4 | GH27 | 9 | 513 | 28 | 446 | 0.584 |
0.6784 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| F8ARA0 | GH27 | 9 | 515 | 51 | 510 | 0.5782 |
0.6571 |
| UKT64945.1 | GH27 | 10 | 513 | 54 | 475 | 0.5675 |
0.6739 |
| A0A386HQM5 | GH27 | 9 | 515 | 77 | 506 | 0.5584 |
0.6703 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1uas-assembly1.cif.gz_A | 10 | 515 | 6 | 362 | 0.6055 |
0.7337 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.