PROTEIN: HRGMv2_3018_2_195
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Protein File & Metadata
Source:
HRGMv2_3018_2_195.pdb
Genome ID:
Protein ID:
HRGMv2_3018_2_195
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Protein Sequence
MKIKIYISDI VMVLFFHISF ISMPYIQSYN LLKYAVAAIT AVFLLPKFKL FFRKKYKAVN 60 ISLLVFLAVI IITSYINKNA ISSRNVFLAS IIYCIIILEG FLLFQYYEYK EKTNHLFKII 120 FYLLLFYVII TDMLIFLKPG LLIQHEGYYF IGNKFTVAYT HIFLTILYWL LKSNGNSKLS 180 LENKLSLFLM FCLTIFISIY INSGSGIVAS VFLILLMCFK ENMKKLMSNP ITPIASILVS 240 CSFFFLFGSI LGTSIMRFIV VNVLGKDPTL TGRMIIYSNV ADILPGHIFT GYGHGSTFEV 300 CMELIGAPNT QNGLMEILTQ YGIFGVISFF VLIYMCFKNH KISNINAAFP LVAMLYIYIL 360 LASIEITLSQ NFILVLGLVI LLFNNNGKNK TSHQENCNAR TN 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A5P3FVF2-F1-model_v4 | 4 | 395 | 11 | 393 | 0.6889 |
0.7629 |
| AF-X8F0V5-F1-model_v4 | 5 | 402 | 39 | 477 | 0.6285 |
0.7084 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 5 | 389 | 18 | 418 | 0.5289 |
0.7567 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 5 | 389 | 21 | 418 | 0.5251 |
0.751 |
| AF-M4X4V7-F1-model_v4 | GH39 | 5 | 389 | 18 | 419 | 0.5234 |
0.7496 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4UM04-F1-model_v4 | 5 | 395 | 1 | 407 | 0.6781 |
0.728 |
| AF-Q68X15-F1-model_v4 | 4 | 393 | 1 | 405 | 0.6666 |
0.7168 |
| AF-Q9ZDH0-F1-model_v4 | 5 | 391 | 1 | 405 | 0.6637 |
0.7191 |
| AF-O67472-F1-model_v4 | 2 | 389 | 1 | 386 | 0.6461 |
0.6869 |