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PROTEIN: HRGMv2_3017_6_88

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3017_6_88.pdb
Genome ID:
HRGMv2_3017
Protein ID:
HRGMv2_3017_6_88

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKALSLILA   LTMVLALCAC   GQSAPAATEA   PATTAAAAPA   EAPATEATAS   EGKVFNIYAW 60
NEEFKGFFEK   YYTVPEGVTV   NWIITPSDGG   AYQEKLDQAL   QAQSTASDDD   KIDLFLAEAD 120
YIQKYTDSDY   TQDVKPLGVT   DFSNAYAYTV   QTASDANGTV   KGVSFQCCPA   ALIYRRSIAK 180
DVLGTDDPAE   VQAALSDWSK   FNDVAAQAKA   KGYYMTASES   ATYRVFSNNV   ATPWVDENNN 240
LQIDDAIKTW   MTQAKEFSDK   GYTQTCDIWS   DECTAQMFKD   GKTMCYFGPA   WYYNFSMGNA 300
QDAEKGCFGD   WAICEGPQAH   FWGGTWLLAP   VGTDNPTMVA   DIMNTFINDE   DVCTKLVKNE 360
MQFSNNQKVN   EACAANGGND   FLGGQNDTAI   FCELAKNIVF   ENHTIYDQVI   NEDLQKTWRE 420
YCDGDVTEDA   AMANFYALVS   EAYPSIMTP 449
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F002-F1-model_v4 20 446 30 439 0.7156 0.7894
AF-A0A133CPC5-F1-model_v4 47 448 30 423 0.7039 0.7928
AF-K0F1Y0-F1-model_v4 30 447 27 433 0.7036 0.7772
AF-Q8DNN7-F1-model_v4 51 447 33 434 0.6955 0.7894
AF-A0A132Z3C8-F1-model_v4 52 448 33 428 0.6941 0.7842
AF-A0A132ZDH4-F1-model_v4 49 447 29 427 0.6825 0.7653
AF-A0A133CKQ7-F1-model_v4 50 447 37 419 0.6757 0.778
AF-P9WGU9-F1-model_v4 51 448 31 466 0.6756 0.7883
AF-A0A0H3GGY2-F1-model_v4 52 421 22 379 0.6738 0.7871
AF-P59214-F1-model_v4 41 447 30 421 0.6713 0.7624
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 49 447 32 415 0.6584 0.7569
AF-K8E205-F1-model_v4 GH32 50 426 32 344 0.6195 0.7798
AF-A0A7U1BNH7-F1-model_v4 GH10 50 449 28 731 0.5426 0.7582
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 49 447 32 415 0.6584 0.7569
K8E205 GH32 50 426 32 344 0.6195 0.7798
A0A7U1BNH7 GH10 50 449 28 731 0.5426 0.7582
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ixp-assembly1.cif.gz_A 50 444 1 393 0.8219 0.8897
8bfy-assembly1.cif.gz_A 53 445 2 393 0.7466 0.8188
2z8d-assembly2.cif.gz_B 47 448 1 398 0.7452 0.8096
3uor-assembly2.cif.gz_B 51 447 1 388 0.7449 0.8232
7vfq-assembly1.cif.gz_A 52 449 1 394 0.7426 0.8098
7vfq-assembly2.cif.gz_B 52 449 1 396 0.7421 0.8071
2z8d-assembly1.cif.gz_A 48 448 1 400 0.7417 0.8047
7vfr-assembly1.cif.gz_A 51 449 1 397 0.7408 0.805
7vfq-assembly4.cif.gz_D 52 449 1 397 0.74 0.8041
6wpn-assembly1.cif.gz_A 54 448 1 395 0.7357 0.8015
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 50 445 26 422 0.754 0.8411
AF-P94528-F1-model_v4 51 448 32 433 0.7416 0.833
AF-Q9K491-F1-model_v4 26 446 9 424 0.7254 0.781
AF-Q9KEE7-F1-model_v4 52 448 44 445 0.7171 0.82
AF-Q578M8-F1-model_v4 50 448 23 411 0.7038 0.7924
AF-Q8FVS7-F1-model_v4 50 448 23 411 0.7036 0.7922
AF-Q2YKZ9-F1-model_v4 50 448 23 411 0.7034 0.7921
AF-O07009-F1-model_v4 38 447 22 418 0.69 0.7733
AF-Q00749-F1-model_v4 50 448 33 420 0.6846 0.7798
AF-Q53684-F1-model_v4 47 446 23 423 0.6811 0.7801
Download Full SwissProt Results