PROTEIN: HRGMv2_3017_17_28
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Protein File & Metadata
Source:
HRGMv2_3017_17_28.pdb
Genome ID:
Protein ID:
HRGMv2_3017_17_28
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Protein Sequence
MTRYPFPARR TWNVLFALYL LALVYLTRDS QAGLYLLGFF RAQVLSLGLT LAVGLVFLVY 60 NRNRIGSILL DGRVLLFVLF SLTIVIPMAI KRDWQMMYIS MIYCIAVAVL ISYFASLRQT 120 ARAYILVLAL LAAASILCSY GLRLLADRGV LVPPVFENSF QARFYNYLLC YVPINYAKTR 180 NFGIFREPGV YQFFLFLALY LNNYQADWDS GKWTWGLNAL LVTAMLTTFS TCGVAVTAVF 240 LIALYFDRKV YDTPLGRKLS GMLLALLALA AAWLVAAKPP LYTQLKLMVE KLFTSNPSLN 300 DRIDCIKFNL YVIQWDRFVG RELAYILETV THNTSSSTIL FGILGLFFGW LNLFGWVTLV 360 FQGRGHLPMK LVCLVTLAAT FNTENLITNP YFWLFPILAL TEGLLPLANA PRKNLRKA 418
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G288-F1-model_v4 | 2 | 408 | 1 | 405 | 0.6963 |
0.7373 |
| AF-Q9HUG6-F1-model_v4 | 4 | 417 | 15 | 400 | 0.6238 |
0.683 |
| AF-A0A286V175-F1-model_v4 | 4 | 413 | 6 | 475 | 0.6081 |
0.6813 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 4 | 418 | 31 | 813 | 0.5344 |
0.7184 |
| AF-D2IX70-F1-model_v4 | GT1 | 35 | 405 | 112 | 494 | 0.521 |
0.6479 |
| UII34295.1 | GT4 | 4 | 418 | 11 | 585 | 0.5192 |
0.6863 |
| AF-B8DZR6-F1-model_v4 | GT9 | 4 | 406 | 38 | 444 | 0.5151 |
0.6986 |
| AF-D9S8K7-F1-model_v4 | GT4 | 4 | 403 | 9 | 390 | 0.5058 |
0.7205 |
| USX27957.1 | GT9 | 6 | 418 | 12 | 534 | 0.5019 |
0.659 |
| AF-A0A6S6I3C9-F1-model_v4 | GT4 | 5 | 418 | 10 | 765 | 0.4856 |
0.6416 |
| K2DNF3 | GT83 | 11 | 412 | 21 | 807 | 0.4652 |
0.6728 |
| AF-A0A5B7R2V6-F1-model_v4 | GH5_39 | 4 | 400 | 378 | 781 | 0.4489 |
0.6231 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B8IGI7 | GH16_7 | 6 | 406 | 16 | 455 | 0.5286 |
0.737 |
| D2IX70 | GT1 | 35 | 405 | 112 | 494 | 0.521 |
0.6479 |
| UII34295.1 | GT4 | 4 | 418 | 11 | 585 | 0.5192 |
0.6863 |
| B5YD26 | GT9 | 1 | 406 | 5 | 444 | 0.5159 |
0.6945 |
| A0A0C5WHY3 | GT4 | 4 | 418 | 1 | 554 | 0.5065 |
0.6636 |
| D9S8K7 | GT4 | 4 | 403 | 9 | 390 | 0.5058 |
0.7205 |
| D5MJ04 | GT9 | 5 | 417 | 22 | 538 | 0.5054 |
0.6687 |
| H8L3P3 | GT2 | 7 | 407 | 10 | 392 | 0.505 |
0.7042 |
| USX27957.1 | GT9 | 6 | 418 | 12 | 534 | 0.5019 |
0.659 |
| A0A6S6I3C9 | GT4 | 5 | 418 | 10 | 765 | 0.4856 |
0.6416 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 6 | 405 | 1 | 367 | 0.6353 |
0.7139 |
| AF-Q9HUG6-F1-model_v4 | 4 | 417 | 15 | 400 | 0.6238 |
0.683 |
| AF-Q02729-F1-model_v4 | 4 | 407 | 6 | 402 | 0.5894 |
0.6505 |