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PROTEIN: HRGMv2_2980_6_37

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2980_6_37.pdb
Genome ID:
HRGMv2_2980
Protein ID:
HRGMv2_2980_6_37

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDRTLRKAVA   LAACFLTLAA   AVPALPARAA   GPAQVTISVN   GQSAAPLAGA   RSVGANIEMS 60
LVSDEMWQAN   GNWMEQSFFA   GELSMMRWGY   DAWAFDWETG   RPLSENRYWG   GLNSRDAAGT 120
FGLEEFIAFC   KKNGIVPFVM   IPIESLDAFG   GEAPLEKVKA   LTASMAQYIA   SQGVELCYFD 180
MGNEPWNNGA   GGSGNAQYLG   SLFPEFQQIV   KSANPNYRLV   LQRAPQNVLW   NGWNNTLVSA 240
AQGAFDAYDD   HRYSFYGWNK   YFDKNGDDLL   APGSPLEGKE   AILGECNIGW   TPVQDNWDEG 300
HVRDLGGSMA   LLNAMLDLID   GGQYGYIVSW   PSHYPSKASI   SGCPNKSFGW   FDLDRWYLDG 360
DTVRLTGPAL   AHRIINQNVL   ENKLDAASTG   EKVRVFAYEN   AQQTDLRVIV   LNKWDATQLT 420
LQIPQQYSSA   SAMVLRGESV   WDTAPQYINH   IAGNQPVNGG   VFVNDIPGEA   VVVYTFSAGQ 480
DSAAPAAPAL   NLPAAGETRA   STAQAFAWQP   VPGARNYRLV   VSLHPDLSDP   VIDTYTGRAV 540
RYQSSEELLP   GTAYYWAVTA   GNAAGAASSA   VSGFTTQAKE   SGVFTLNNDS   VYISCSAGWN 600
QQASAGSYRN   DDMSCSEAGG   YAEFTFTGTG   AKLYGIKGDW   CGLADVQVDF   GAPVRVDAYA 660
PAPEAQALLF   DTGELPYGEH   TVTLTVAGEK   NPASTGVWIE   YDKVELFDSQ   NGQPLANKVV 720
WNDDNPNLKK   FSVWNHQSVE   GSYHGDDSSS   NTWKAHVEFS   FTGTNAVLYG   LKGPWCGKAD 780
ITVDGARAAT   VDAYAPEMQL   GQVLYDTGAL   EPGAHTVRLT   VTASKSAQSS   GKWIELDRVV 840
WQ 842
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A2ARH2-F1-model_v4 2 581 6 637 0.5967 0.7472
AF-P35475-F1-model_v4 29 683 24 653 0.5885 0.6932
AF-P48441-F1-model_v4 29 712 14 634 0.5867 0.6902
AF-A0A2R8QK69-F1-model_v4 21 581 19 632 0.5864 0.7535
AF-A0A2R8Q930-F1-model_v4 27 581 23 632 0.585 0.7587
AF-D3ZE16-F1-model_v4 29 582 23 643 0.5823 0.7631
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6I6JW32-F1-model_v4 GH51 32 481 28 483 0.6155 0.8405
AF-A0A1W6LKF9-F1-model_v4 GH51 28 478 18 476 0.6123 0.8261
AF-A0A1H1KTD4-F1-model_v4 GH51 32 479 41 495 0.6097 0.848
AF-A0A7D4PVQ4-F1-model_v4 GH51 32 478 27 477 0.6081 0.8288
AF-A0A1Q2HL23-F1-model_v4 GH51 30 478 20 477 0.6075 0.8252
A0A921M4Q2 GH0 27 515 14 507 0.6017 0.7815
BCM92617.1 GH51 31 478 54 498 0.5996 0.8418
AF-A0A4V0YQH1-F1-model_v4 GH51 4 479 35 548 0.588 0.8166
AF-C4XN81-F1-model_v4 GH51 8 479 36 548 0.5819 0.8135
E1K2B0 GH51 32 479 33 516 0.5731 0.8543
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1H1KTD4 GH51 32 479 41 495 0.6097 0.848
A0A7D4PVQ4 GH51 32 478 27 477 0.6081 0.8288
A0A1Q2HL23 GH51 30 478 20 477 0.6075 0.8252
BCM92617.1 GH51 31 478 54 498 0.5996 0.8418
P35475 GH39 27 683 23 653 0.5883 0.6918
Q8BMG0 GH39 29 712 23 643 0.5826 0.6902
Q3U1Z0 GH39 29 712 23 643 0.5824 0.6897
A0A139WM90 GH39 30 833 14 748 0.5804 0.6378
A0A518K8H2 GH51 2 480 6 524 0.5741 0.7738
E1K2B0 GH51 32 479 33 516 0.5731 0.8543
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6i6r-assembly2.cif.gz_B 32 710 1 599 0.5994 0.7075
6i6x-assembly2.cif.gz_B 31 581 1 597 0.5991 0.7609
6i6r-assembly1.cif.gz_A 31 712 1 597 0.5986 0.7071
4obs-assembly1.cif.gz_A 31 578 1 594 0.5979 0.7617
4obr-assembly1.cif.gz_A 32 578 1 595 0.5969 0.762
6i6x-assembly1.cif.gz_A 32 712 1 605 0.5964 0.7011
4obr-assembly2.cif.gz_B 32 581 1 606 0.5955 0.7626
4mj2-assembly2.cif.gz_B 32 581 1 607 0.5948 0.7628
5ndx-assembly1.cif.gz_A 31 575 1 606 0.5933 0.7672
3w81-assembly1.cif.gz_A 31 581 1 616 0.593 0.7642
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P35475-F1-model_v4 29 683 24 653 0.5885 0.6932
AF-P48441-F1-model_v4 29 712 14 634 0.5867 0.6902
AF-Q01634-F1-model_v4 29 675 23 653 0.5855 0.6901
Download Full SwissProt Results