PROTEIN: HRGMv2_2980_4_44
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Protein File & Metadata
Source:
HRGMv2_2980_4_44.pdb
Genome ID:
Protein ID:
HRGMv2_2980_4_44
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Protein Sequence
MEKLCSIQDV GIYLSVDHEM RKNILRNRLM EQLDGFDSYY RNTAEIERII VKDLQELQIP 60 QNSIVVPQNA YYFPDGTFYS LEAKIAFQMC DVGMTFWCDE NVWYLPYMLQ YLLEAKQRTF 120 LHGAGIAVNG TDGYLLVAFG GIGKTCFVAN AIKQDNVKLL GDDLIIAGAD GTLRSYPRPF 180 CLYPYHKTLF PQFFDGKKLH FEEVRTDRYF LRASRKLKKK LHIPDSIIYD YLPVSPIHLF 240 PQEKVQVEPV RVKKVFVLRR VVGLMGLQIR PATDLDGIAS FAHSVIQHEW SIGIRLEFNY 300 LAHQEHDYGD MANAQYQTIR NCLKHAEEFY YIDIPENMEA ERVSLELNKV ILGGQKCED 359
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q38BN8-F1-model_v4 | 1 | 355 | 33 | 497 | 0.5994 |
0.7182 |
| AF-Q4DTE4-F1-model_v4 | 1 | 358 | 33 | 495 | 0.5969 |
0.7086 |
| AF-Q4E5Y9-F1-model_v4 | 1 | 356 | 33 | 494 | 0.5958 |
0.7103 |
| AF-E9AG56-F1-model_v4 | 1 | 356 | 34 | 563 | 0.5786 |
0.7222 |
| AF-I1K9K7-F1-model_v4 | 29 | 355 | 1 | 325 | 0.5615 |
0.6407 |
| AF-Q9HTZ7-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5373 |
0.651 |
| AF-Q9PP01-F1-model_v4 | 1 | 354 | 4 | 449 | 0.5362 |
0.6553 |
| AF-Q2G1W2-F1-model_v4 | 1 | 354 | 16 | 457 | 0.5289 |
0.6491 |
| AF-A0A1C1CYB4-F1-model_v4 | 1 | 354 | 109 | 460 | 0.526 |
0.6501 |
| AF-Q586V2-F1-model_v4 | 1 | 354 | 7 | 444 | 0.5244 |
0.6421 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJB65639.1 | GT2 | 1 | 355 | 30 | 351 | 0.5491 |
0.7628 |
| AF-A0A494TL75-F1-model_v4 | GT2 | 1 | 354 | 31 | 347 | 0.5476 |
0.7685 |
| AF-A0A127EZJ5-F1-model_v4 | GT2 | 1 | 355 | 44 | 361 | 0.5388 |
0.7628 |
| AF-A0A7D5Y7F2-F1-model_v4 | GT2 | 1 | 359 | 440 | 803 | 0.5184 |
0.7256 |
| AF-A0A7H8XP94-F1-model_v4 | GT2 | 1 | 359 | 423 | 784 | 0.5147 |
0.7154 |
| AF-A0A7L6BC24-F1-model_v4 | GT2 | 1 | 356 | 421 | 781 | 0.5137 |
0.7185 |
| AF-A0A1C4V1M9-F1-model_v4 | GT2 | 1 | 356 | 440 | 800 | 0.5128 |
0.7226 |
| AF-A0A160SYZ9-F1-model_v4 | GT2 | 1 | 353 | 386 | 729 | 0.5105 |
0.7215 |
| AF-A0A2U9PBD5-F1-model_v4 | GT2 | 1 | 354 | 470 | 822 | 0.5088 |
0.7295 |
| QXQ07936.1 | GT2 | 75 | 354 | 1 | 229 | 0.4558 |
0.7855 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJB65639.1 | GT2 | 1 | 355 | 30 | 351 | 0.5491 |
0.7628 |
| A0A127EZJ5 | GT2 | 1 | 355 | 44 | 361 | 0.5388 |
0.7628 |
| WAC25127.1 | GT2 | 1 | 355 | 37 | 355 | 0.5367 |
0.7577 |
| A0A2K8U543 | GT2 | 1 | 355 | 75 | 392 | 0.5312 |
0.7682 |
| A0A160SYZ9 | GT2 | 1 | 353 | 386 | 729 | 0.5105 |
0.7215 |
| A0A2U9PBD5 | GT2 | 1 | 354 | 470 | 822 | 0.5088 |
0.7295 |
| QXQ07936.1 | GT2 | 75 | 354 | 1 | 229 | 0.4558 |
0.7855 |
| USE34901.1 | GT1 | 1 | 358 | 2 | 369 | 0.4273 |
0.6527 |
| A0A1Y6D201 | GT60 | 1 | 355 | 433 | 713 | 0.4258 |
0.7084 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1yvy-assembly2.cif.gz_B | 1 | 354 | 2 | 445 | 0.5418 |
0.6534 |
| 2pc9-assembly1.cif.gz_A | 1 | 354 | 2 | 442 | 0.5395 |
0.6552 |
| 1yvy-assembly1.cif.gz_A | 1 | 355 | 17 | 449 | 0.5391 |
0.6498 |
| 6asn-assembly1.cif.gz_A | 1 | 354 | 6 | 450 | 0.5377 |
0.6584 |
| 1xkv-assembly1.cif.gz_A | 1 | 354 | 1 | 440 | 0.5367 |
0.6517 |
| 1xkv-assembly1.cif.gz_B | 1 | 354 | 2 | 445 | 0.5353 |
0.6521 |
| 2pc9-assembly4.cif.gz_D | 1 | 354 | 1 | 438 | 0.5344 |
0.6478 |
| 1ylh-assembly1.cif.gz_A | 1 | 354 | 5 | 450 | 0.5325 |
0.6519 |
| 1ygg-assembly1.cif.gz_A | 1 | 354 | 5 | 453 | 0.5318 |
0.6524 |
| 1oen-assembly1.cif.gz_A | 1 | 354 | 2 | 452 | 0.5311 |
0.6497 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RVP6-F1-model_v4 | 1 | 354 | 14 | 455 | 0.5606 |
0.6549 |
| AF-P13735-F1-model_v4 | 1 | 355 | 7 | 445 | 0.5456 |
0.6409 |
| AF-A1S1X0-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5434 |
0.6583 |
| AF-Q3ILP3-F1-model_v4 | 1 | 354 | 9 | 440 | 0.5432 |
0.6595 |
| AF-Q089V1-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5423 |
0.6574 |
| AF-A8GYT2-F1-model_v4 | 1 | 354 | 94 | 441 | 0.5422 |
0.6671 |
| AF-A4YBE7-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5417 |
0.656 |
| AF-Q4KK03-F1-model_v4 | 1 | 354 | 10 | 442 | 0.5416 |
0.657 |
| AF-Q0I0F2-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5416 |
0.6556 |
| AF-A5VX32-F1-model_v4 | 1 | 354 | 10 | 441 | 0.5415 |
0.6567 |