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PROTEIN: HRGMv2_2980_16_3

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2980_16_3.pdb
Genome ID:
HRGMv2_2980
Protein ID:
HRGMv2_2980_16_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MPISIAVLTR   DQNDLLSLLQ   TCSAVNVTVF   APDALTPHCL   DKFDCACVLG   GTQTEPLVLS 60
VGCREIVEDF   SASGKRVFFE   YTLSFCQNYC   MPPQSTRFLR   LVCADSTLAG   LPEGTLLDDQ 120
CNLHAAPYYS   CNLAKPLLVY   KKGLSEHSRQ   LLSAQDLADH   QQYGLWLETP   TVAVCSFCLC 180
NFVRARFAPV   GAWRRVIAAL   LTWLCGAEIA   LPTAGCSYYS   TDRPGSINDA   AAAAIGWFER 240
SGVLLNEGRE   GVLEGLATEI   LPNGVQKSAA   PIRTDCAGET   ALAYFFHHLA   TGSETSLRRA 300
AALEAFVYDK   MQIKTGRFAG   MLRWTNIAWE   VCYQDDMARA   MFITLFKAFY   GKGREYLPQC 360
RAALEFLMNT   TGPDGLRPAR   TDNLNMTEQD   FAALSAKDGA   FPCAHYNAFY   LACLLLYGKM 420
ENDARCLAVG   ERGMRSLMKA   YPGTVREQSE   TQELCRLLLP   LSWLYHATGR   EGDKQLLYTV 480
VNDLEKLRHS   SGAYLEWDSD   YSAACSKQEG   GECSLLSRNG   DPVADLLYSN   NWVPLGLMQA 540
YFVTGDETFF   TLFRAHADFL   IHSQIHSADP   RIDGAWARGF   DVNLMEVYGL   PNDVGWGPWA 600
IESGWTVAEI   AAGLYSGLLK   EQLKGFYQ 628
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C1C7U9-F1-model_v4 215 627 20 407 0.582 0.7488
AF-P32140-F1-model_v4 225 626 11 411 0.579 0.7263
AF-Q8ZKT7-F1-model_v4 225 626 11 411 0.5788 0.7259
AF-B0S6K7-F1-model_v4 223 625 8 399 0.5779 0.7308
AF-A0A175W671-F1-model_v4 4 628 8 408 0.569 0.761
AF-P51606-F1-model_v4 223 624 20 407 0.5612 0.737
AF-P51607-F1-model_v4 223 624 21 408 0.5588 0.7362
AF-O74556-F1-model_v4 7 627 7 397 0.5587 0.7411
AF-P82343-F1-model_v4 223 624 21 408 0.5585 0.7353
AF-U7PHS6-F1-model_v4 219 625 20 405 0.5452 0.7465
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Q2HN47-F1-model_v4 GH76 222 628 5 360 0.6307 0.8166
AF-A0A3G8R417-F1-model_v4 GH88 222 627 2 371 0.6172 0.7856
AF-W0RD84-F1-model_v4 GH88 223 625 8 384 0.6167 0.7854
AF-A0A858RQI1-F1-model_v4 GH76 223 623 14 361 0.6158 0.831
AF-A0A1U9NMQ7-F1-model_v4 GH76 225 625 27 373 0.6155 0.833
AF-A0A1W6LJG0-F1-model_v4 GH76 223 626 24 374 0.6147 0.8282
AF-A0A518DVK0-F1-model_v4 GH88 223 621 8 375 0.6108 0.7853
AF-A0A518ART4-F1-model_v4 GH76 222 624 34 387 0.6106 0.828
AF-A0A5P2G6J6-F1-model_v4 GH76 223 618 19 350 0.6105 0.8306
AF-A0A2Z2KIR2-F1-model_v4 GH88 224 627 16 379 0.608 0.7944
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
G0GBZ5 GH88 225 628 1 377 0.6214 0.7859
A0A7M2RFN4 GH88 223 627 2 371 0.6204 0.7897
A0A510I242 GH88 220 627 10 375 0.6174 0.7978
W0RD84 GH88 223 625 8 384 0.6167 0.7854
A0A858RQI1 GH76 223 623 14 361 0.6158 0.831
A0A1W6LJG0 GH76 223 626 24 374 0.6147 0.8282
A0A172TDI0 GH88 222 627 9 388 0.6136 0.7807
A0A5Q2P239 GH88 225 627 11 381 0.6121 0.7885
A0A089JT76 GH88 223 627 9 376 0.6116 0.7876
WHX48537.1 GH88 221 623 1 372 0.611 0.7868
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5zhb-assembly2.cif.gz_B 224 622 5 379 0.621 0.7901
5zhb-assembly1.cif.gz_A 224 622 5 380 0.6208 0.7891
3vw5-assembly3.cif.gz_C 223 622 2 387 0.6115 0.7685
7d5g-assembly1.cif.gz_A 225 621 8 389 0.6109 0.7749
8wbv-assembly1.cif.gz_A 225 621 10 391 0.6056 0.77
4z4l-assembly1.cif.gz_A 225 622 10 392 0.6051 0.769
3wkf-assembly1.cif.gz_A 224 624 14 403 0.6033 0.7686
5x32-assembly1.cif.gz_A 222 621 2 380 0.6025 0.7615
5zig-assembly3.cif.gz_C 223 624 10 397 0.6005 0.7614
3gt5-assembly1.cif.gz_A 222 623 1 391 0.5953 0.7424
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5LH66-F1-model_v4 225 623 7 392 0.6183 0.7801
AF-E6UB41-F1-model_v4 223 622 2 387 0.6132 0.7699
AF-P0DKY4-F1-model_v4 224 622 3 387 0.6126 0.7717
AF-B8DZK4-F1-model_v4 224 621 7 389 0.6013 0.7605
AF-F8WRK9-F1-model_v4 224 624 16 405 0.5987 0.7681
AF-B3XZI5-F1-model_v4 222 622 1 402 0.5983 0.7416
AF-Q8E372-F1-model_v4 223 627 24 398 0.5975 0.7803
AF-P29954-F1-model_v4 223 625 7 387 0.5956 0.756
AF-T2KLZ3-F1-model_v4 226 624 36 400 0.5853 0.7857
AF-P32140-F1-model_v4 225 626 11 411 0.579 0.7263
Download Full SwissProt Results