PROTEIN: HRGMv2_2966_73_2
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Protein File & Metadata
Source:
HRGMv2_2966_73_2.pdb
Genome ID:
Protein ID:
HRGMv2_2966_73_2
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Detailed structural information will appear here after analysis...
Protein Sequence
MQTYLTYEQF GAIGDGVADD MPAIVRTHAE ANRLGLPVRA RDHALYRIAN RSATAEIGTD 60 TNWSDASFVI DDRGLDRCDA PVFHVKSLTV TEVPFALEKL AAGQTHIDNP TGKELFLRVW 120 NEEHRDYIRY GGNRDDGCAR FDCLNLLPDG TLSTPVSFDF DTITRLCAET VDTDTLTISG 180 GHFTTIANQC ESFYNYHGRG ITVDRCRVRI RGLTHSVTGE LDHGAPYNGF LLIAGCVHVT 240 VEDSVFCAHR TYYTMGSGGV TVPMGTYDIT FSSAIDVTFR NCRQTTDITD RAYWGLIGSN 300 NCREILVEDC TFSRFDAHMG VTDCTIRRTN LGWMGITAIG FGTFTLENVT SYGDWFVNLR 360 EDYGCSWRGR LVIRDCTWHC RGRLHPLIRA CNPGTHDFGY ECVLPDVELD GFTVLDAEEA 420 GALSVYSDPD CGKTRGDHPM RLPEKVTVCG RLCGVKQVTL CGTPGRMTST RFTAAYTTEA 480
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GQG6-F1-model_v4 | 1 | 480 | 140 | 838 | 0.6436 |
0.868 |
| AF-A0A0H3GMB3-F1-model_v4 | 1 | 480 | 301 | 864 | 0.6368 |
0.8656 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0E3YVR7-F1-model_v4 | GH28 | 1 | 480 | 37 | 447 | 0.6445 |
0.7355 |
| AF-D2Q146-F1-model_v4 | GH87 | 1 | 480 | 244 | 659 | 0.5446 |
0.7295 |
| UYY59314.1 | GH87 | 2 | 480 | 164 | 504 | 0.5168 |
0.7625 |
| AF-A0A0C5WPW3-F1-model_v4 | CBM32 , PL29 | 1 | 453 | 83 | 528 | 0.512 |
0.7164 |
| AF-A0A1C4Z0M7-F1-model_v4 | GH87 | 2 | 480 | 256 | 672 | 0.498 |
0.6702 |
| AF-A0A7H0HM77-F1-model_v4 | GH87 | 2 | 480 | 256 | 672 | 0.4969 |
0.67 |
| QTP58736.1 | CBM2 | 1 | 480 | 127 | 583 | 0.4802 |
0.6848 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E3YVR7 | GH28 | 1 | 480 | 37 | 447 | 0.6445 |
0.7355 |
| A0A8D9L5J6 | GH28 | 1 | 480 | 32 | 446 | 0.6376 |
0.7197 |
| UXX79066.1 | PL29 | 2 | 454 | 68 | 505 | 0.6118 |
0.7136 |
| A0A290S4E3 | PL29 | 2 | 454 | 66 | 512 | 0.6116 |
0.6981 |
| QZE12858.1 | PL29 | 2 | 453 | 63 | 492 | 0.6066 |
0.7147 |
| D5EI33 | PL29 | 2 | 453 | 66 | 496 | 0.597 |
0.6997 |
| G4QNH8 | PL29 | 2 | 454 | 35 | 522 | 0.5938 |
0.6842 |
| A0A517YR45 | PL29 | 2 | 453 | 71 | 500 | 0.5936 |
0.7032 |
| A0A454BCS5 | PL29 | 1 | 454 | 78 | 564 | 0.5867 |
0.6896 |
| QZT36344.1 | PL29 | 1 | 453 | 48 | 521 | 0.5845 |
0.6685 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ru4-assembly1.cif.gz_C | 4 | 480 | 1 | 479 | 0.6795 |
0.7641 |
| 4y9v-assembly1.cif.gz_A | 1 | 480 | 18 | 476 | 0.6699 |
0.7889 |
| 7w1d-assembly1.cif.gz_C | 1 | 480 | 60 | 526 | 0.5926 |
0.7064 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.