PROTEIN: HRGMv2_2966_4_50
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Protein File & Metadata
Source:
HRGMv2_2966_4_50.pdb
Genome ID:
Protein ID:
HRGMv2_2966_4_50
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Protein Sequence
MKRRISLLVL IAMLLCALPS CSGDAEETTP ADTTAIESET TAVETENPYD PHLPTADYDG 60 YTMTFAVRGK ESDHTNWDGT DIVVEELTGD SLNDAIYERN TYMGDTYNVQ IASIFCGDTS 120 VATTGSDMFK RVEKSILGGD EEFAAILTSP YDSIGYALSG YVLDLGGIPH LDFTKPWWNQ 180 NVREALTFGS RSYLATGEIT IVDNYATHVM IFDKKLATDF SIDDPYADVR TGKWTLDKFF 240 QNAALATTDL DGDGAMGMDD RYGYAYWQDA VFSLLYATGN SFGSIIDGKP ELTFYTDHTV 300 DTWNKLMTFL SSGDTYATYD YADAYGWNID GAFFNLLANH QILYGYSTIY TVITLRELET 360 EFGILPNPKF DESQQNYITA PHAYGHTMLT VPITITDPDR TGLLLEAFAA KSAEIVTPAF 420 YDKTLIGKST RDEDSAEMLS IIFGNMHYDI GHFFMWGSLP HRVMLAWNDK KTDIGSIYAG 480 VEKSARRDME KCASLFE 497
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJP10085.1 | GH154 | 54 | 471 | 703 | 1165 | 0.3737 |
0.6485 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4mfi-assembly1.cif.gz_A | 59 | 494 | 5 | 403 | 0.706 |
0.8013 |
| 6x84-assembly2.cif.gz_B | 59 | 495 | 1 | 414 | 0.696 |
0.7745 |
| 7nbz-assembly2.cif.gz_B | 57 | 489 | 1 | 385 | 0.6945 |
0.7966 |
| 7nbz-assembly1.cif.gz_A | 58 | 489 | 1 | 377 | 0.6885 |
0.7968 |
| 6r1b-assembly4.cif.gz_D | 60 | 490 | 2 | 382 | 0.6861 |
0.793 |
| 6hus-assembly1.cif.gz_A | 51 | 493 | 8 | 423 | 0.6824 |
0.7699 |
| 7c71-assembly2.cif.gz_B | 61 | 490 | 1 | 415 | 0.6823 |
0.7589 |
| 5tu0-assembly1.cif.gz_A | 57 | 491 | 1 | 385 | 0.682 |
0.7843 |
| 7c6z-assembly1.cif.gz_A | 61 | 490 | 1 | 415 | 0.6812 |
0.758 |
| 3quf-assembly1.cif.gz_A | 56 | 488 | 1 | 385 | 0.6808 |
0.7821 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P58300-F1-model_v4 | 30 | 491 | 19 | 434 | 0.6241 |
0.7117 |
| AF-Q9V297-F1-model_v4 | 55 | 491 | 71 | 453 | 0.6041 |
0.753 |
| AF-D4GP35-F1-model_v4 | 3 | 486 | 25 | 459 | 0.5989 |
0.6733 |