PROTEIN: HRGMv2_2966_4_44
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2966_4_44.pdb
Genome ID:
Protein ID:
HRGMv2_2966_4_44
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNRSMKHTLS ILLCAMLLAS TISCGSTSGD TESDRNTTQT ETTETTNADT EETTEPNRLD 60 ALGAHDYSGS VYTVLDANPN ASMHINIPQE EQTGEMINDT LWTRDVTLED RYKLTIDYVQ 120 KTEGGADVLR SSVLAGDHAY NLVIGTAGGD LSSLALDGSL ANLLDLPELS LDQKWWSTLM 180 YDSLRFHDAM YITTGDITPT MYQIAACTFV NTDLAEKYTI DCDFVEEVRN GTWTWDLVGT 240 LSEGITQDLN GDGQWSYADD LFGNIGCFST YLIPGCAVDL CTISDDGSTL TLTAMNERTV 300 DVCEKLQKVF EPTNPISAES NDFVKSAFKE DRALFLTHIT ESAAVHLRDM ESDYLILPVA 360 KYDEAQSGYR SAVNVWATAY VSIPSTAVDE MTGVVTEAMA YWSYENMRPL AFDLTYKAKT 420 VRDERSIEML DVVFDNLYCS FSELFDFGGI SSVFWDVLSD GGEIASAVEA VTPKAESEIK 480 SFSEKWGAQ 489
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1E9-F1-model_v4 | 65 | 485 | 39 | 416 | 0.6543 |
0.794 |
| AF-K0F1Y0-F1-model_v4 | 67 | 481 | 49 | 433 | 0.6301 |
0.7606 |
| AF-Q32AT3-F1-model_v4 | 2 | 489 | 18 | 438 | 0.5963 |
0.6734 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7U1BNH7 | GH10 | 69 | 483 | 28 | 737 | 0.4781 |
0.6727 |
| A0A1Q2TKJ3 | GH49 | 69 | 482 | 386 | 797 | 0.4598 |
0.6659 |
| UJP10085.1 | GH154 | 1 | 461 | 680 | 1165 | 0.3439 |
0.5409 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4hs7-assembly2.cif.gz_B | 65 | 484 | 1 | 376 | 0.6947 |
0.8009 |
| 4rk2-assembly1.cif.gz_A | 69 | 481 | 1 | 393 | 0.6897 |
0.7811 |
| 4mfi-assembly1.cif.gz_A | 68 | 488 | 5 | 403 | 0.6836 |
0.7726 |
| 7nbz-assembly2.cif.gz_B | 68 | 479 | 1 | 385 | 0.6791 |
0.7741 |
| 6dtr-assembly1.cif.gz_A | 69 | 481 | 1 | 393 | 0.6778 |
0.7672 |
| 7bvt-assembly1.cif.gz_A | 68 | 482 | 1 | 391 | 0.6728 |
0.7637 |
| 7v09-assembly2.cif.gz_B | 68 | 481 | 1 | 403 | 0.6713 |
0.753 |
| 5tu0-assembly1.cif.gz_A | 2 | 485 | 1 | 385 | 0.6707 |
0.7673 |
| 3uor-assembly2.cif.gz_B | 70 | 488 | 1 | 394 | 0.6707 |
0.7608 |
| 1zkb-assembly1.cif.gz_A | 69 | 477 | 4 | 370 | 0.6684 |
0.7817 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O07009-F1-model_v4 | 66 | 488 | 32 | 421 | 0.6065 |
0.717 |
| AF-Q1CBH5-F1-model_v4 | 2 | 488 | 20 | 439 | 0.6017 |
0.6809 |
| AF-Q1CNC9-F1-model_v4 | 1 | 488 | 20 | 439 | 0.6016 |
0.6809 |
| AF-Q66FU7-F1-model_v4 | 1 | 488 | 20 | 439 | 0.6008 |
0.6802 |
| AF-Q7CKV7-F1-model_v4 | 1 | 488 | 20 | 439 | 0.6007 |
0.68 |
| AF-A0QXD9-F1-model_v4 | 62 | 481 | 56 | 477 | 0.5986 |
0.7003 |
| AF-Q57IS0-F1-model_v4 | 1 | 489 | 18 | 438 | 0.5971 |
0.6744 |
| AF-P0AG80-F1-model_v4 | 2 | 489 | 18 | 438 | 0.597 |
0.6741 |
| AF-Q5PJK8-F1-model_v4 | 1 | 489 | 18 | 438 | 0.597 |
0.674 |
| AF-P0AG81-F1-model_v4 | 2 | 489 | 18 | 438 | 0.5969 |
0.6742 |