PROTEIN: HRGMv2_2966_20_17
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Protein File & Metadata
Source:
HRGMv2_2966_20_17.pdb
Genome ID:
Protein ID:
HRGMv2_2966_20_17
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Protein Sequence
MSHRFNLPTS LAGVDSLGRM LPVAEIPRAE KPRAVGLFYF LWCGEHGRHA PYDVSKIVEA 60 DPDAGYHTDS PLWGAIGTYH HWGEPFYGYY YSDDEWVIRR HMMLFCDAGV DFLYFDTTNA 120 VIYEKNVRIV LRVLQEFYDA GYRIPKVMFY TNTASGKTVE AIYEAIYRPH YCPDTWFYFE 180 GKPVIIAVEE ECSPETQAFF NIKMAQWPNE PDKQGGWPWM DFTKPQRVFE NLRGEAEVIN 240 VSVAQHPQLR FGDSVLYGET GNCGRAYHDG ANDPDPKAFL GGANFGEQFA RAIDVDVPVV 300 LVTGWNEWIA GRWQGIPERP IMFVDCANPE YSRDLEMMRG GYFDNYYLQF IACIRAYKGQ 360 TLPETDRNIC YHVPGGNLHR DNDGYGTHYT NDTGRNALAT LELFPEGDTI SVRVAAHTAL 420 ADANDRDGSF MQVFVTGAGE KNGLFTTRIT QDGAFLAKVD PADFTISVTE TAIAAEIAAD 480 SVTYRIPRAL LPDGELWWKA ADSRETIRCG ADFYDKGDTI PAGRLWFVER 530
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2Z3GXD0-F1-model_v4 | CBM6 | 10 | 504 | 32 | 537 | 0.5702 |
0.6709 |
| A0A9E0XS09 | GH0 | 28 | 360 | 40 | 350 | 0.5701 |
0.7749 |
| AF-A0A402D0L7-F1-model_v4 | CBM13 | 2 | 530 | 17 | 510 | 0.5655 |
0.6074 |
| UXX79358.1 | GH0 | 28 | 505 | 25 | 397 | 0.5601 |
0.6875 |
| AF-A0A1H1Q2X0-F1-model_v4 | GH99 | 26 | 528 | 37 | 401 | 0.5495 |
0.6917 |
| AF-A0A1H1Q2T9-F1-model_v4 | GH0 | 13 | 518 | 36 | 428 | 0.5468 |
0.6652 |
| AF-A0A5Q3QPE2-F1-model_v4 | GH99 | 2 | 506 | 38 | 414 | 0.5401 |
0.6708 |
| AF-S0DER7-F1-model_v4 | GH99 | 2 | 506 | 39 | 409 | 0.5395 |
0.6756 |
| AF-A0A1S8ZSY5-F1-model_v4 | GH99 | 2 | 506 | 38 | 414 | 0.5394 |
0.6695 |
| AF-A0A2S1YRL2-F1-model_v4 | GH99 | 2 | 505 | 38 | 414 | 0.539 |
0.6699 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2Z3GXD0 | CBM6 | 10 | 504 | 32 | 537 | 0.5702 |
0.6709 |
| A0A1H1Q2X0 | GH99 | 26 | 528 | 37 | 401 | 0.5495 |
0.6917 |
| A0A385SY43 | GH99 | 1 | 506 | 39 | 414 | 0.5382 |
0.67 |
| A0A5B9FTL0 | GH99 | 2 | 505 | 41 | 417 | 0.5364 |
0.6683 |
| A0A518BUF1 | GH99 | 1 | 514 | 42 | 498 | 0.5308 |
0.6137 |
| A0A517SPH8 | GH99 | 1 | 503 | 24 | 405 | 0.5297 |
0.643 |
| A0A250KIB6 | GH99 | 2 | 507 | 52 | 420 | 0.5281 |
0.6734 |
| A0A3S9P9Z2 | GH99 | 2 | 506 | 60 | 432 | 0.5238 |
0.6709 |
| A0A402D453 | CBM13 | 1 | 530 | 20 | 662 | 0.5145 |
0.5798 |
| A0A2Z4G712 | GH99 | 2 | 508 | 129 | 513 | 0.4764 |
0.6413 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.