PROTEIN: HRGMv2_2966_18_6
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Protein File & Metadata
Source:
HRGMv2_2966_18_6.pdb
Genome ID:
Protein ID:
HRGMv2_2966_18_6
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Protein Sequence
MKTYQRMLSL LLCGLLLMTS CGKAEIQNPE TDAVAGESDT IAESETEPVE TEISDDLPDK 60 DLGGWDMDIV CHEDALSGTW TFTAEELNGE LINDEIYNRT ARLEDRFNFN YNVVPPEGSD 120 VWGRMGTVLT NLVAAGDDVY DLAIYYTYQL QAQMVQGKLF YNMLKIPYIH FDKPWWHTEI 180 NDTFTLYGYL PAILSDYSLN SYQYANLLVY NTAMAEDRGI DGLYDMVRDG TWTMDSFQKI 240 VESVTTDTNG DGKYDENDTY GYATNFGYHA LTWCYAIGEM GVHLREDGVE LGYQSEKFST 300 MTEWLYHMLY GSNNTFEIGW DKECDIKWDE NRVFIQAIWF NDLEKFRQNE SGYGLLPYPK 360 FDEQQEKYYT YDDCRCGAFG VPIVSAAENR ENTGLILEAL SADSYKHLIP AYLENMVTFK 420 LSRDEDSLEM LDYIMAGRVY DIGYSYPDPN NYTWVIYYKL KGSDGKLAST LAGYSESTKK 480 YYNDKILTAY KELGEMAW 498
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 2 | 482 | 19 | 797 | 0.4791 |
0.6136 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Q2TKJ3 | GH49 | 2 | 482 | 19 | 797 | 0.4791 |
0.6136 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4rk2-assembly1.cif.gz_A | 64 | 481 | 1 | 393 | 0.7055 |
0.8025 |
| 6dtr-assembly1.cif.gz_A | 63 | 484 | 1 | 393 | 0.7053 |
0.8026 |
| 4mfi-assembly1.cif.gz_A | 64 | 491 | 6 | 403 | 0.7032 |
0.8019 |
| 7nbz-assembly2.cif.gz_B | 62 | 482 | 1 | 385 | 0.6946 |
0.7972 |
| 7nbz-assembly1.cif.gz_A | 63 | 482 | 1 | 377 | 0.6873 |
0.7959 |
| 3quf-assembly1.cif.gz_A | 62 | 481 | 1 | 385 | 0.686 |
0.7883 |
| 4gqo-assembly1.cif.gz_A | 63 | 480 | 1 | 404 | 0.6841 |
0.7691 |
| 6x84-assembly2.cif.gz_B | 63 | 489 | 1 | 414 | 0.6823 |
0.7608 |
| 1peb-assembly1.cif.gz_A | 64 | 480 | 4 | 366 | 0.6772 |
0.8004 |
| 7c6x-assembly7.cif.gz_G | 66 | 485 | 1 | 416 | 0.6743 |
0.7506 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P58300-F1-model_v4 | 38 | 484 | 17 | 434 | 0.5908 |
0.6734 |
| AF-Q9V297-F1-model_v4 | 28 | 484 | 23 | 453 | 0.5765 |
0.6517 |
| AF-D4GP35-F1-model_v4 | 5 | 479 | 21 | 459 | 0.5725 |
0.6395 |