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PROTEIN: HRGMv2_2966_102_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2966_102_5.pdb
Genome ID:
HRGMv2_2966
Protein ID:
HRGMv2_2966_102_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSSLFERIQR   TCVSGAVSVR   NYIAISLRSF   ILLIFCTVFL   MHMLPITAYA   AHSAGEVLYH 60
QDFTRVSTAH   LAGIRAGNAN   AQESRIGVTV   DGLVIDPNGE   RRTYAILPEI   ANTDTYTVDL 120
TFRFRSISRT   NGYFAFLLTC   TGDRPSNITA   VVLRADGSVD   DFGNLDNEIV   QHYENGDPIR 180
LTIPVVDGVL   HSLTISSGMD   IQTLERTSLL   RIPDGSRGFC   VRNASVLVED   TAILYGTDYE 240
MPTGYYATHS   YAEDDGARTD   ILSPATGDAD   VYLLPLTFAC   TALLFTGMKI   RRHI 294
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q69LA0-F1-model_v4 32 293 1 260 0.5468 0.6435
AF-Q4CP62-F1-model_v4 55 262 23 276 0.5346 0.7467
AF-O94401-F1-model_v4 52 243 22 258 0.5057 0.7861
AF-I1KK88-F1-model_v4 51 276 27 288 0.4715 0.6681
AF-I1JLU9-F1-model_v4 52 238 24 254 0.4605 0.7697
AF-P43555-F1-model_v4 51 241 32 259 0.4233 0.7608
AF-Q2FWU4-F1-model_v4 52 245 195 439 0.4132 0.7591
AF-Q4E5U3-F1-model_v4 4 266 61 857 0.4089 0.6785
AF-Q8T2J5-F1-model_v4 53 266 32 444 0.4028 0.7128
AF-Q4D859-F1-model_v4 11 267 152 838 0.3999 0.6764
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A958WDG3 CBM0 53 236 46 245 0.5463 0.7925
AF-A0A6F8XJ04-F1-model_v4 CBM66 53 238 30 206 0.5318 0.8045
QYJ02657.1 GH16 53 252 44 257 0.5094 0.7482
AF-A0A810NXV7-F1-model_v4 CBM66 , PL3_4 52 289 34 465 0.4637 0.6962
BCJ43814.1 CBM66 , PL3_4 53 281 44 476 0.4563 0.7245
AF-A0A1C5JCY1-F1-model_v4 CBM66 , PL3 53 283 33 390 0.4454 0.6847
AF-A0A1C4UZJ2-F1-model_v4 CBM66 , PL3 53 282 33 421 0.443 0.687
AF-A0A6F8YHK1-F1-model_v4 CBM66 , PL1 53 280 31 513 0.44 0.7245
AF-A0A6F8Y2B6-F1-model_v4 CBM66 , PL1 53 280 27 507 0.4331 0.7076
AF-A0A1C5GRL5-F1-model_v4 CBM66 , PL3_4 53 285 32 296 0.4325 0.6573
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2R4FLE4 CBM66 53 238 15 191 0.5999 0.8043
QYJ02657.1 GH16 53 252 44 257 0.5094 0.7482
BCJ43814.1 CBM66 , PL3_4 53 281 44 476 0.4563 0.7245
A0A810N5E0 CBM66 , PL3_4 53 268 35 321 0.4297 0.7076
I0GXB6 CBM66 , PL3_4 52 275 41 502 0.4251 0.7011
A0A9W6NNP5 CBM66 , PL9_1 53 270 29 411 0.4161 0.7386
A0A1C4XML7 CBM66 , PL1_7 53 271 31 516 0.4071 0.6968
A0A810NG81 CBM66 , PL1 53 274 26 455 0.4054 0.6918
A0A9Q9MGR1 CBM66 , PL1 53 269 32 338 0.4036 0.6875
A0A2Z5G1R7 CBM66 42 294 28 500 0.3968 0.6511
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5ly8-assembly1.cif.gz_A 51 237 1 226 0.5491 0.7605
2e6v-assembly2.cif.gz_B 54 238 1 217 0.5479 0.778
2e6v-assembly4.cif.gz_D 54 238 1 217 0.5478 0.7778
2e6v-assembly1.cif.gz_A 54 238 1 221 0.546 0.7802
2duq-assembly1.cif.gz_A 55 238 1 226 0.5426 0.7847
2dur-assembly2.cif.gz_B 54 238 2 228 0.5345 0.778
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O94401-F1-model_v4 52 243 22 258 0.5057 0.7861
AF-Q5RCF0-F1-model_v4 53 238 47 276 0.4695 0.7884
AF-Q2HJD1-F1-model_v4 53 238 47 276 0.4693 0.7871
AF-Q9H0V9-F1-model_v4 53 238 47 276 0.4692 0.7871
AF-P49256-F1-model_v4 53 238 51 278 0.4617 0.7806
AF-P43555-F1-model_v4 51 241 32 259 0.4233 0.7608
AF-Q9LFH9-F1-model_v4 28 244 1 269 0.3984 0.7456
Download Full SwissProt Results